Protein : Qrob_P0519060.2 Q. robur
Protein Identifier  ? Qrob_P0519060.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PF12800 - 4Fe-4S binding domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 156  
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0009522 photosystem I A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
GO:0009055 electron carrier activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
GO:0051539 4 iron, 4 sulfur cluster binding Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
GO:0051536 iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
GO:0042651 thylakoid membrane The pigmented membrane of any thylakoid.
GO:0009773 photosynthetic electron transport in photosystem I A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, X) through a chain of electron transport molecules in the thylakoid membrane until they reach ferredoxin which passes the electron to the ultimate electron acceptor; NADP.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|atr:AmtrCp079 75 155 + 81 none 100.00 81 91.36 3e-49 psaC photosystem I iron-sulfur center
blastp_kegg lcl|sot:4099906 75 155 + 81 none 100.00 81 91.36 3e-49 psaC SotuCp076 photosystem I iron-sulfur center
blastp_kegg lcl|sly:3950411 75 155 + 81 none 100.00 81 91.36 3e-49 psaC LyesC2p016 photosystem I subunit VII
blastp_kegg lcl|vvi:4025040 75 155 + 81 none 100.00 81 91.36 3e-49 psaC ViviCp075 photosystem I iron-sulfur center
blastp_kegg lcl|vvi:7498557 75 155 + 81 none 100.00 81 91.36 3e-49 psaC ViviM_p071 PSI 9 kDa protein
blastp_kegg lcl|pop:Poptr_cp080 75 155 + 81 none 100.00 81 91.36 3e-49 psaC photosystem I subunit VII
blastp_kegg lcl|pmum:18668092 75 155 + 81 none 100.00 81 91.36 3e-49 psaC CP95_p014 photosystem I subunit VII
blastp_kegg lcl|pper:PrpeC_p073 75 155 + 81 none 100.00 81 91.36 3e-49 psaC photosystem I subunit VII
blastp_kegg lcl|fve:10251584 75 155 + 81 none 100.00 81 91.36 3e-49 psaC FvH4_C0106 photosystem I subunit VII
blastp_kegg lcl|fve:101298959 75 155 + 81 none 100.00 81 91.36 3e-49 photosystem I iron-sulfur center-like
blastp_pdb 3lw5_C 75 155 + 81 none 100.00 81 90.12 5e-50 mol:protein length:81 Photosystem I iron-sulfur center
blastp_pdb 2wsf_C 75 155 + 81 none 100.00 81 90.12 5e-50 mol:protein length:81 PHOTOSYSTEM I IRON-SULFUR CENTER
blastp_pdb 2wse_C 75 155 + 81 none 100.00 81 90.12 5e-50 mol:protein length:81 PHOTOSYSTEM I IRON-SULFUR CENTER
blastp_pdb 2wsc_C 75 155 + 81 none 100.00 81 90.12 5e-50 mol:protein length:81 PHOTOSYSTEM I IRON-SULFUR CENTER
blastp_pdb 2o01_C 76 155 + 80 none 100.00 80 90.00 4e-49 mol:protein length:80 Photosystem I iron-sulfur center
blastp_pdb 3pcq_C 76 155 + 80 none 100.00 80 80.00 3e-44 mol:protein length:80 Photosystem I iron-sulfur center
blastp_pdb 1jb0_C 76 155 + 80 none 100.00 80 80.00 3e-44 mol:protein length:80 PHOTOSYSTEM I IRON-SULFUR CENTER
blastp_pdb 1k0t_A 76 155 + 80 none 100.00 80 81.25 4e-44 mol:protein length:80 PSAC SUBUNIT OF PHOTOSYSTEM I
blastp_uniprot_sprot sp|Q0ZIW7|PSAC_VITVI 75 155 + 81 none 100.00 81 91.36 1e-50 Photosystem I iron-sulfur center OS Vitis vinifera GN psaC PE 3 SV 1
blastp_uniprot_sprot sp|P62094|PSAC_TOBAC 75 155 + 81 none 100.00 81 91.36 1e-50 Photosystem I iron-sulfur center OS Nicotiana tabacum GN psaC PE 1 SV 2
blastp_uniprot_sprot sp|Q2PMN3|PSAC_SOYBN 75 155 + 81 none 100.00 81 91.36 1e-50 Photosystem I iron-sulfur center OS Glycine max GN psaC PE 1 SV 1
blastp_uniprot_sprot sp|Q2VEC9|PSAC_SOLTU 75 155 + 81 none 100.00 81 91.36 1e-50 Photosystem I iron-sulfur center OS Solanum tuberosum GN psaC PE 3 SV 1
blastp_uniprot_sprot sp|Q2MI49|PSAC_SOLLC 75 155 + 81 none 100.00 81 91.36 1e-50 Photosystem I iron-sulfur center OS Solanum lycopersicum GN psaC PE 3 SV 1
blastp_uniprot_sprot sp|Q2MID6|PSAC_SOLBU 75 155 + 81 none 100.00 81 91.36 1e-50 Photosystem I iron-sulfur center OS Solanum bulbocastanum GN psaC PE 3 SV 1
blastp_uniprot_sprot sp|A4GYW7|PSAC_POPTR 75 155 + 81 none 100.00 81 91.36 1e-50 Photosystem I iron-sulfur center OS Populus trichocarpa GN psaC PE 3 SV 1
blastp_uniprot_sprot sp|Q14FA7|PSAC_POPAL 75 155 + 81 none 100.00 81 91.36 1e-50 Photosystem I iron-sulfur center OS Populus alba GN psaC PE 3 SV 1
blastp_uniprot_sprot sp|Q09FZ5|PSAC_PLAOC 75 155 + 81 none 100.00 81 91.36 1e-50 Photosystem I iron-sulfur center OS Platanus occidentalis GN psaC PE 3 SV 1
blastp_uniprot_sprot sp|Q06GK6|PSAC_PIPCE 75 155 + 81 none 100.00 81 91.36 1e-50 Photosystem I iron-sulfur center OS Piper cenocladum GN psaC PE 3 SV 1
rpsblast_cdd gnl|CDD|177005 75 155 + 81 none 100.00 81 90.12 2e-43 CHL00065 psaC photosystem I subunit VII.
rpsblast_cdd gnl|CDD|132092 76 155 + 80 none 100.00 80 85.00 4e-41 TIGR03048 PS_I_psaC photosystem I iron-sulfur protein PsaC. Members of this family are PsaC an essential component of photosystem I (PS-I) reaction center in Cyanobacteria and chloroplasts. This small protein about 80 amino acids in length contains two copies of the ferredoxin-like 4Fe-4S binding site (pfam00037) and therefore eight conserved Cys residues. This protein is also called photosystem I subunit VII.

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 123 142 20 PS51379 none 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. IPR017896
ProSiteProfiles 75 105 31 PS51379 none 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. IPR017896
PANTHER 1 155 155 PTHR24960 none none none
Hamap 75 155 81 MF_01303 "MetaCyc:PWY-101","MetaCyc:PWY-6785" Photosystem I iron-sulfur center [psaC]. IPR017491
Phobius 36 155 120 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
TIGRFAM 76 155 80 TIGR03048 "MetaCyc:PWY-101","MetaCyc:PWY-6785" PS_I_psaC: photosystem I iron-sulfur protein PsaC IPR017491
Phobius 6 17 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSitePatterns 85 96 12 PS00198 none 4Fe-4S ferredoxin-type iron-sulfur binding region signature. IPR017900
PANTHER 1 155 155 PTHR24960:SF30 "MetaCyc:PWY-101","MetaCyc:PWY-6785";signature_desc=SUBFAMILY NOT NAMED none IPR017491
Phobius 18 35 18 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 80 100 21 PF00037 none 4Fe-4S binding domain IPR001450
Gene3D 82 142 61 G3DSA:3.30.70.20 none none none
Pfam 123 135 13 PF12800 none 4Fe-4S binding domain IPR001450
Phobius 1 35 35 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 72 140 69 SSF54862 none none none

1 Localization

Analysis Start End Length
TMHMM 5 22 17

0 Qtllist

0 Targeting