Protein : Qrob_P0512870.2 Q. robur
Protein Identifier  ? Qrob_P0512870.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=5) K00454 - lipoxygenase [EC:1.13.11.12] Code Enzyme  EC:1.13.11.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 935  
Kegg Orthology  K00454
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_029150 1 934 + 934 Gaps:33 100.00 921 77.20 0.0 Lipoxygenase 3
blastp_kegg lcl|pop:POPTR_0001s16780g 1 934 + 934 Gaps:31 100.00 923 75.51 0.0 hypothetical protein
blastp_kegg lcl|cmo:103500686 1 934 + 934 Gaps:27 100.00 907 77.40 0.0 linoleate 13S-lipoxygenase 3-1 chloroplastic
blastp_kegg lcl|csv:101204952 1 934 + 934 Gaps:27 100.00 907 76.19 0.0 linoleate 13S-lipoxygenase 3-1 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10024819mg 1 934 + 934 Gaps:41 100.00 931 74.22 0.0 hypothetical protein
blastp_kegg lcl|cit:102622489 1 934 + 934 Gaps:46 100.00 932 74.14 0.0 linoleate 13S-lipoxygenase 3-1 chloroplastic-like
blastp_kegg lcl|sot:102597498 1 934 + 934 Gaps:34 100.00 914 75.16 0.0 LOX-H3 LOX3.1 linoleate 13S-lipoxygenase 3-1 chloroplastic-like (EC:1.13.11.12)
blastp_kegg lcl|pvu:PHAVU_010G128800g 1 933 + 933 Gaps:43 99.89 919 75.49 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0003s06560g 1 934 + 934 Gaps:31 100.00 925 73.41 0.0 POPTRDRAFT_756717 lipoxygenase family protein
blastp_kegg lcl|gmx:100793614 1 933 + 933 Gaps:47 99.89 927 74.41 0.0 linoleate 13S-lipoxygenase 3-1 chloroplastic-like
blastp_pdb 2sbl_A 79 934 + 856 Gaps:41 99.28 839 46.22 0.0 mol:protein length:839 LIPOXYGENASE-1
blastp_pdb 2sbl_B 79 934 + 856 Gaps:41 99.28 839 46.22 0.0 mol:protein length:839 LIPOXYGENASE-1
blastp_pdb 1yge_A 79 934 + 856 Gaps:41 99.28 839 46.22 0.0 mol:protein length:839 LIPOXYGENASE-1
blastp_pdb 1f8n_A 79 934 + 856 Gaps:41 99.28 839 46.22 0.0 mol:protein length:839 LIPOXYGENASE-1
blastp_pdb 2iuk_B 70 934 + 865 Gaps:49 98.38 864 45.06 0.0 mol:protein length:864 SEED LIPOXYGENASE
blastp_pdb 2iuk_A 70 934 + 865 Gaps:49 98.38 864 45.06 0.0 mol:protein length:864 SEED LIPOXYGENASE
blastp_pdb 1fgr_A 79 934 + 856 Gaps:41 99.28 839 46.10 0.0 mol:protein length:839 SEED LIPOXYGENASE-1
blastp_pdb 1fgq_A 79 934 + 856 Gaps:41 99.28 839 46.10 0.0 mol:protein length:839 SEED LIPOXYGENASE-1
blastp_pdb 3pzw_A 79 934 + 856 Gaps:41 99.28 839 46.10 0.0 mol:protein length:839 Seed lipoxygenase-1
blastp_pdb 1fgt_A 79 934 + 856 Gaps:41 99.28 839 46.10 0.0 mol:protein length:839 SEED LIPOXYGENASE-1
blastp_uniprot_sprot sp|O24371|LOX31_SOLTU 1 934 + 934 Gaps:34 100.00 914 75.16 0.0 Linoleate 13S-lipoxygenase 3-1 chloroplastic OS Solanum tuberosum GN LOX3.1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LNR3|LOX3_ARATH 1 934 + 934 Gaps:41 100.00 919 71.49 0.0 Lipoxygenase 3 chloroplastic OS Arabidopsis thaliana GN LOX3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FNX8|LOX4_ARATH 1 934 + 934 Gaps:44 100.00 926 70.84 0.0 Lipoxygenase 4 chloroplastic OS Arabidopsis thaliana GN LOX4 PE 2 SV 1
blastp_uniprot_sprot sp|Q8H016|LOX6_ORYSJ 56 934 + 879 Gaps:44 95.32 918 66.06 0.0 Probable lipoxygenase 6 OS Oryza sativa subsp. japonica GN Os03g0179900 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XV13|LOX5_ORYSJ 91 934 + 844 Gaps:27 91.32 899 63.34 0.0 Putative lipoxygenase 5 OS Oryza sativa subsp. japonica GN Os04g0447100 PE 3 SV 2
blastp_uniprot_sprot sp|Q9CAG3|LOX6_ARATH 80 934 + 855 Gaps:33 91.17 917 53.11 0.0 Lipoxygenase 6 chloroplastic OS Arabidopsis thaliana GN LOX6 PE 1 SV 1
blastp_uniprot_sprot sp|O24370|LOX21_SOLTU 70 934 + 865 Gaps:39 93.21 899 48.81 0.0 Linoleate 13S-lipoxygenase 2-1 chloroplastic OS Solanum tuberosum GN LOX2.1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8GSM2|LOX23_HORVU 172 934 + 763 Gaps:17 85.27 896 49.35 0.0 Lipoxygenase 2.3 chloroplastic OS Hordeum vulgare GN LOX2.3 PE 1 SV 1
blastp_uniprot_sprot sp|Q43190|LOX14_SOLTU 79 934 + 856 Gaps:31 98.02 860 47.45 0.0 Probable linoleate 9S-lipoxygenase 4 OS Solanum tuberosum GN LOX1.4 PE 2 SV 1
blastp_uniprot_sprot sp|Q41238|LOX16_SOLTU 79 934 + 856 Gaps:31 98.37 857 47.45 0.0 Linoleate 9S-lipoxygenase 6 (Fragment) OS Solanum tuberosum GN LOX1.6 PE 1 SV 1

34 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 239 934 696 PS51393 none Lipoxygenase iron-binding catalytic domain profile. IPR013819
ProSiteProfiles 94 236 143 PS50095 none PLAT domain profile. IPR001024
Pfam 149 235 87 PF01477 none PLAT/LH2 domain IPR001024
Gene3D 359 450 92 G3DSA:4.10.372.10 "UniPathway:UPA00382" none IPR027433
PANTHER 417 934 518 PTHR11771 none none IPR000907
PANTHER 304 384 81 PTHR11771 none none IPR000907
SMART 78 237 160 SM00308 none Lipoxygenase homology 2 (beta barrel) domain IPR001024
PANTHER 145 265 121 PTHR11771:SF38 none none none
PANTHER 76 124 49 PTHR11771:SF38 none none none
PANTHER 304 384 81 PTHR11771:SF38 none none none
Gene3D 587 934 348 G3DSA:1.20.245.10 none none none
PANTHER 76 124 49 PTHR11771 none none IPR000907
PRINTS 588 605 18 PR00087 none Lipoxygenase signature IPR013819
PRINTS 570 587 18 PR00087 none Lipoxygenase signature IPR013819
PRINTS 608 628 21 PR00087 none Lipoxygenase signature IPR013819
PRINTS 419 435 17 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 846 860 15 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 303 322 20 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 232 253 22 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 271 287 17 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 525 549 25 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 458 477 20 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 371 392 22 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 206 224 19 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
SUPERFAMILY 241 934 694 SSF48484 none none IPR013819
PANTHER 145 265 121 PTHR11771 none none IPR000907
ProSitePatterns 588 602 15 PS00711 none Lipoxygenases iron-binding region signature 1. IPR020833
Pfam 248 918 671 PF00305 none Lipoxygenase IPR013819
Gene3D 452 584 133 G3DSA:3.10.450.60 none none none
PANTHER 417 934 518 PTHR11771:SF38 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting