Protein : Qrob_P0511000.2 Q. robur
Protein Identifier  ? Qrob_P0511000.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K03033 - 26S proteasome regulatory subunit N3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 393  
Kegg Orthology  K03033
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0030234 enzyme regulator activity Binds to and modulates the activity of an enzyme.
GO:0000502 proteasome complex A large multisubunit complex which catalyzes protein degradation, found in eukaryotes, archaea and some bacteria. In eukaryotes, this complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core.
GO:0042176 regulation of protein catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100819526 1 392 + 392 Gaps:1 80.20 490 90.59 0.0 probable 26S proteasome non-ATPase regulatory subunit 3-like
blastp_kegg lcl|gmx:100787034 1 392 + 392 none 80.49 487 92.86 0.0 probable 26S proteasome non-ATPase regulatory subunit 3-like
blastp_kegg lcl|gmx:100814379 1 392 + 392 none 80.49 487 92.35 0.0 probable 26S proteasome non-ATPase regulatory subunit 3-like
blastp_kegg lcl|pvu:PHAVU_009G019100g 1 392 + 392 none 80.49 487 92.35 0.0 hypothetical protein
blastp_kegg lcl|mtr:MTR_3g114480 1 392 + 392 Gaps:3 80.61 490 91.14 0.0 26S proteasome non-ATPase regulatory subunit
blastp_kegg lcl|pvu:PHAVU_001G003600g 1 392 + 392 Gaps:1 80.20 490 88.04 0.0 hypothetical protein
blastp_kegg lcl|eus:EUTSA_v10007479mg 1 392 + 392 Gaps:1 80.53 488 88.30 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0977830 1 392 + 392 none 79.84 491 89.80 0.0 26S proteasome regulatory subunit S3 putative
blastp_kegg lcl|cam:101499693 1 392 + 392 Gaps:1 80.53 488 91.09 0.0 probable 26S proteasome non-ATPase regulatory subunit 3-like
blastp_kegg lcl|crb:CARUB_v10008972mg 1 392 + 392 Gaps:1 80.53 488 88.04 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q9LNU4|PSD3A_ARATH 1 392 + 392 Gaps:1 80.53 488 88.55 0.0 26S proteasome non-ATPase regulatory subunit 3 homolog A OS Arabidopsis thaliana GN RPN3A PE 1 SV 3
blastp_uniprot_sprot sp|P93768|PSMD3_TOBAC 1 392 + 392 none 80.33 488 89.80 0.0 Probable 26S proteasome non-ATPase regulatory subunit 3 OS Nicotiana tabacum GN 21D7 PE 2 SV 1
blastp_uniprot_sprot sp|Q06364|PSMD3_DAUCA 1 392 + 392 none 80.16 489 88.27 0.0 Probable 26S proteasome non-ATPase regulatory subunit 3 OS Daucus carota GN 21D7 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LQR8|PSD3B_ARATH 1 392 + 392 none 80.49 487 85.71 0.0 26S proteasome non-ATPase regulatory subunit 3 homolog B OS Arabidopsis thaliana GN RPN3B PE 1 SV 2
blastp_uniprot_sprot sp|P25161|PSMD3_DROME 11 392 + 382 Gaps:5 77.13 494 52.23 2e-122 Probable 26S proteasome non-ATPase regulatory subunit 3 OS Drosophila melanogaster GN Rpn3 PE 2 SV 1
blastp_uniprot_sprot sp|Q2KJ46|PSMD3_BOVIN 9 392 + 384 Gaps:5 71.72 534 51.96 6e-119 26S proteasome non-ATPase regulatory subunit 3 OS Bos taurus GN PSMD3 PE 2 SV 1
blastp_uniprot_sprot sp|O43242|PSMD3_HUMAN 9 392 + 384 Gaps:5 71.72 534 51.70 1e-118 26S proteasome non-ATPase regulatory subunit 3 OS Homo sapiens GN PSMD3 PE 1 SV 2
blastp_uniprot_sprot sp|P14685|PSMD3_MOUSE 9 392 + 384 Gaps:5 72.26 530 51.70 2e-118 26S proteasome non-ATPase regulatory subunit 3 OS Mus musculus GN Psmd3 PE 1 SV 3
blastp_uniprot_sprot sp|Q9U5Z8|PSMD3_ANOST 20 392 + 373 Gaps:5 74.40 500 53.49 3e-117 Probable 26S proteasome non-ATPase regulatory subunit 3 OS Anopheles stephensi GN DOXA2 PE 3 SV 1
blastp_uniprot_sprot sp|O61470|PSMD3_ANOGA 11 392 + 382 Gaps:5 76.81 496 52.49 4e-117 Probable 26S proteasome non-ATPase regulatory subunit 3 OS Anopheles gambiae GN Dox-A2 PE 3 SV 2
rpsblast_cdd gnl|CDD|149439 325 391 + 67 Gaps:1 100.00 68 60.29 7e-22 pfam08375 Rpn3_C Proteasome regulatory subunit C-terminal. This eukaryotic domain is found at the C-terminus of 26S proteasome regulatory subunits such as the non-ATPase Rpn3 subunit which is essential for proteasomal function. It occurs together with the PCI/PINT domain (pfam01399).
rpsblast_cdd gnl|CDD|201772 217 319 + 103 Gaps:4 99.00 100 36.36 2e-15 pfam01399 PCI PCI domain. This domain has also been called the PINT motif (Proteasome Int-6 Nip-1 and TRIP-15).
rpsblast_cdd gnl|CDD|197859 251 343 + 93 Gaps:6 98.86 88 37.93 3e-13 smart00753 PAM PCI/PINT associated module.
rpsblast_cdd gnl|CDD|197510 251 343 + 93 Gaps:6 98.86 88 37.93 3e-13 smart00088 PINT motif in proteasome subunits Int-6 Nip-1 and TRIP-15. Also called the PCI (Proteasome COP9 Initiation factor 3) domain. Unknown function.
rpsblast_kog gnl|CDD|37792 1 392 + 392 Gaps:6 79.51 493 61.73 1e-155 KOG2581 KOG2581 KOG2581 26S proteasome regulatory complex subunit RPN3/PSMD3 [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37899 108 323 + 216 Gaps:15 56.09 394 19.91 7e-08 KOG2688 KOG2688 KOG2688 Transcription-associated recombination protein - Thp1p [Cell cycle control cell division chromosome partitioning].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 392 392 PTHR10758:SF2 none none none
PANTHER 1 392 392 PTHR10758 none none none
Pfam 216 321 106 PF01399 none PCI domain IPR000717
Pfam 325 391 67 PF08375 none Proteasome regulatory subunit C-terminal IPR013586
SMART 79 250 172 SM00753 none PCI/PINT associated module IPR013143
Coils 359 387 29 Coil none none none
SUPERFAMILY 250 326 77 SSF46785 none none none
Gene3D 250 318 69 G3DSA:1.10.10.10 none none IPR011991
SMART 250 343 94 SM00088 none motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 IPR000717

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting