Protein : Qrob_P0504940.2 Q. robur
Protein Identifier  ? Qrob_P0504940.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K05356 - all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85] Code Enzyme  EC:2.5.1.85
Gene Prediction Quality  validated Protein length 

Sequence

Length: 219  
Kegg Orthology  K05356
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
GO:0008299 isoprenoid biosynthetic process The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100805842 1 217 + 217 none 51.30 423 89.86 2e-138 solanesyl diphosphate synthase 2 chloroplastic-like
blastp_kegg lcl|gmx:100783538 1 217 + 217 none 50.94 426 88.94 8e-138 prenyl transferase-like
blastp_kegg lcl|cam:101502183 1 217 + 217 none 51.54 421 89.40 3e-137 solanesyl diphosphate synthase 2 chloroplastic-like
blastp_kegg lcl|tcc:TCM_032237 1 217 + 217 none 48.65 446 88.48 2e-135 Solanesyl diphosphate synthase 2 isoform 1
blastp_kegg lcl|fve:101297041 1 217 + 217 none 51.54 421 88.02 3e-135 solanesyl diphosphate synthase 2 chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_005G064200g 1 217 + 217 none 51.42 422 87.10 8e-135 hypothetical protein
blastp_kegg lcl|pmum:103325805 1 217 + 217 none 50.23 432 87.10 1e-134 probable solanesyl-diphosphate synthase 3 chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa006010mg 1 217 + 217 none 50.23 432 87.10 2e-134 hypothetical protein
blastp_kegg lcl|mdm:103427372 1 217 + 217 none 51.30 423 86.64 2e-134 probable solanesyl-diphosphate synthase 3 chloroplastic
blastp_kegg lcl|pxb:103936506 1 217 + 217 none 51.30 423 86.64 2e-134 probable solanesyl-diphosphate synthase 3 chloroplastic
blastp_pdb 3aq0_H 1 200 + 200 none 57.47 348 40.50 1e-49 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_G 1 200 + 200 none 57.47 348 40.50 1e-49 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_F 1 200 + 200 none 57.47 348 40.50 1e-49 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_E 1 200 + 200 none 57.47 348 40.50 1e-49 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_D 1 200 + 200 none 57.47 348 40.50 1e-49 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_C 1 200 + 200 none 57.47 348 40.50 1e-49 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_B 1 200 + 200 none 57.47 348 40.50 1e-49 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_A 1 200 + 200 none 57.47 348 40.50 1e-49 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3apz_B 1 200 + 200 none 57.47 348 40.50 3e-49 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3apz_A 1 200 + 200 none 57.47 348 40.50 3e-49 mol:protein length:348 Geranyl diphosphate synthase
blastp_uniprot_sprot sp|Q8S948|SPS1_ARATH 1 217 + 217 none 53.45 406 82.49 2e-127 Solanesyl diphosphate synthase 1 OS Arabidopsis thaliana GN SPS1 PE 1 SV 1
blastp_uniprot_sprot sp|Q76FS5|SPS2_ARATH 1 217 + 217 none 52.04 417 79.26 1e-125 Solanesyl diphosphate synthase 2 chloroplastic OS Arabidopsis thaliana GN SPS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q75HZ9|SPS2_ORYSJ 1 217 + 217 none 53.85 403 79.26 4e-123 Solanesyl-diphosphate synthase 2 chloroplastic OS Oryza sativa subsp. japonica GN SPS2 PE 1 SV 2
blastp_uniprot_sprot sp|Q0INZ4|SPS3_ORYSJ 1 217 + 217 none 58.33 372 78.80 5e-123 Probable solanesyl-diphosphate synthase 3 chloroplastic (Fragment) OS Oryza sativa subsp. japonica GN SPS3 PE 3 SV 1
blastp_uniprot_sprot sp|P72580|PREA_SYNY3 1 217 + 217 none 67.18 323 58.99 1e-82 Prenyl transferase OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN preA PE 3 SV 2
blastp_uniprot_sprot sp|Q1XDL8|PREA_PYRYE 1 217 + 217 none 67.18 323 50.23 2e-74 Prenyl transferase OS Pyropia yezoensis GN preA PE 3 SV 1
blastp_uniprot_sprot sp|P31171|PREA_CYAPA 2 217 + 216 none 66.87 323 57.87 4e-74 Prenyl transferase OS Cyanophora paradoxa GN preA PE 3 SV 1
blastp_uniprot_sprot sp|P51268|PREA_PORPU 1 217 + 217 none 67.18 323 49.77 2e-73 Prenyl transferase OS Porphyra purpurea GN preA PE 3 SV 1
blastp_uniprot_sprot sp|Q9TLS1|PREA_CYACA 2 201 + 200 none 61.92 323 53.00 4e-65 Prenyl transferase OS Cyanidium caldarium GN preA PE 3 SV 1
blastp_uniprot_sprot sp|Q6CBH3|COQ1_YARLI 2 216 + 215 Gaps:6 48.89 452 42.99 3e-51 Probable hexaprenyl pyrophosphate synthase mitochondrial OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN COQ1 PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 2 180 179 PF00348 none Polyprenyl synthetase IPR000092
ProSitePatterns 102 114 13 PS00444 none Polyprenyl synthases signature 2. IPR000092
PANTHER 1 218 218 PTHR12001 none none IPR017446
SUPERFAMILY 2 216 215 SSF48576 none none IPR008949
Gene3D 2 216 215 G3DSA:1.10.600.10 none none IPR008949
PANTHER 1 218 218 PTHR12001:SF18 none none IPR014120

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting