Protein : Qrob_P0504930.2 Q. robur
Protein Identifier  ? Qrob_P0504930.2 Organism . Name  Quercus robur
Score  38.0 Score Type  egn
Protein Description  (M=2) K05356 - all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85] Code Enzyme  EC:2.5.1.85
Gene Prediction Quality  validated Protein length 

Sequence

Length: 237  
Kegg Orthology  K05356
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
GO:0008299 isoprenoid biosynthetic process The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0001s38950g 1 225 + 225 Gaps:29 46.56 421 76.53 4e-85 POPTRDRAFT_550337 solanesyl diphosphate synthase family protein
blastp_kegg lcl|rcu:RCOM_1182760 1 225 + 225 Gaps:30 46.43 420 75.38 3e-81 solanesyl diphosphate synthase putative (EC:2.5.1.30)
blastp_kegg lcl|pper:PRUPE_ppa006010mg 1 225 + 225 Gaps:38 47.92 432 70.05 3e-79 hypothetical protein
blastp_kegg lcl|pmum:103325805 1 225 + 225 Gaps:38 47.92 432 68.60 4e-78 probable solanesyl-diphosphate synthase 3 chloroplastic
blastp_kegg lcl|tcc:TCM_032237 1 225 + 225 Gaps:12 49.55 446 63.80 3e-77 Solanesyl diphosphate synthase 2 isoform 1
blastp_kegg lcl|fve:101297041 1 225 + 225 Gaps:29 46.56 421 69.39 9e-76 solanesyl diphosphate synthase 2 chloroplastic-like
blastp_kegg lcl|mdm:103448906 1 225 + 225 Gaps:31 46.81 423 68.69 2e-75 probable solanesyl-diphosphate synthase 3 chloroplastic
blastp_kegg lcl|pxb:103931560 1 225 + 225 Gaps:27 46.81 423 68.18 3e-75 probable solanesyl-diphosphate synthase 3 chloroplastic
blastp_kegg lcl|vvi:100246988 1 225 + 225 Gaps:29 46.56 421 70.92 2e-73 prenyl transferase-like
blastp_kegg lcl|mdm:103427372 1 225 + 225 Gaps:27 46.81 423 67.17 3e-73 probable solanesyl-diphosphate synthase 3 chloroplastic
blastp_pdb 3aq0_H 117 226 + 110 Gaps:19 33.62 348 44.44 8e-16 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_G 117 226 + 110 Gaps:19 33.62 348 44.44 8e-16 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_F 117 226 + 110 Gaps:19 33.62 348 44.44 8e-16 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_E 117 226 + 110 Gaps:19 33.62 348 44.44 8e-16 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_D 117 226 + 110 Gaps:19 33.62 348 44.44 8e-16 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_C 117 226 + 110 Gaps:19 33.62 348 44.44 8e-16 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_B 117 226 + 110 Gaps:19 33.62 348 44.44 8e-16 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3aq0_A 117 226 + 110 Gaps:19 33.62 348 44.44 8e-16 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3apz_B 117 226 + 110 Gaps:19 33.62 348 44.44 9e-16 mol:protein length:348 Geranyl diphosphate synthase
blastp_pdb 3apz_A 117 226 + 110 Gaps:19 33.62 348 44.44 9e-16 mol:protein length:348 Geranyl diphosphate synthase
blastp_uniprot_sprot sp|Q76FS5|SPS2_ARATH 80 225 + 146 Gaps:1 34.77 417 70.34 3e-59 Solanesyl diphosphate synthase 2 chloroplastic OS Arabidopsis thaliana GN SPS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8S948|SPS1_ARATH 1 225 + 225 Gaps:43 44.83 406 63.74 6e-59 Solanesyl diphosphate synthase 1 OS Arabidopsis thaliana GN SPS1 PE 1 SV 1
blastp_uniprot_sprot sp|Q0INZ4|SPS3_ORYSJ 125 225 + 101 none 27.15 372 83.17 2e-50 Probable solanesyl-diphosphate synthase 3 chloroplastic (Fragment) OS Oryza sativa subsp. japonica GN SPS3 PE 3 SV 1
blastp_uniprot_sprot sp|Q75HZ9|SPS2_ORYSJ 125 225 + 101 none 25.06 403 82.18 2e-49 Solanesyl-diphosphate synthase 2 chloroplastic OS Oryza sativa subsp. japonica GN SPS2 PE 1 SV 2
blastp_uniprot_sprot sp|P72580|PREA_SYNY3 125 227 + 103 Gaps:3 30.96 323 60.00 5e-29 Prenyl transferase OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN preA PE 3 SV 2
blastp_uniprot_sprot sp|P31171|PREA_CYAPA 126 227 + 102 Gaps:3 30.65 323 51.52 4e-26 Prenyl transferase OS Cyanophora paradoxa GN preA PE 3 SV 1
blastp_uniprot_sprot sp|Q1XDL8|PREA_PYRYE 130 226 + 97 Gaps:3 29.10 323 53.19 2e-25 Prenyl transferase OS Pyropia yezoensis GN preA PE 3 SV 1
blastp_uniprot_sprot sp|P51268|PREA_PORPU 129 225 + 97 Gaps:3 29.10 323 50.00 1e-23 Prenyl transferase OS Porphyra purpurea GN preA PE 3 SV 1
blastp_uniprot_sprot sp|Q653T6|SPS1_ORYSJ 119 226 + 108 Gaps:19 26.74 430 48.70 6e-20 Solanesyl-diphosphate synthase 1 mitochondrial OS Oryza sativa subsp. japonica GN SPS1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9TLS1|PREA_CYACA 134 225 + 92 Gaps:3 27.55 323 43.82 5e-18 Prenyl transferase OS Cyanidium caldarium GN preA PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 211 225 15 PS00723 none Polyprenyl synthases signature 1. IPR000092
SUPERFAMILY 127 228 102 SSF48576 none none IPR008949
Gene3D 127 227 101 G3DSA:1.10.600.10 none none IPR008949
PANTHER 124 225 102 PTHR12001:SF18 none none IPR014120
Pfam 157 229 73 PF00348 none Polyprenyl synthetase IPR000092
PANTHER 124 225 102 PTHR12001 none none IPR017446

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting