Protein : Qrob_P0483830.2 Q. robur
Protein Identifier  ? Qrob_P0483830.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K00411 - ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2] Code Enzyme  EC:1.10.2.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 273  
Kegg Orthology  K00411
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051537 2 iron, 2 sulfur cluster binding Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
GO:0008121 ubiquinol-cytochrome-c reductase activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.
GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa009818mg 1 272 + 272 Gaps:8 100.00 276 85.14 3e-165 hypothetical protein
blastp_kegg lcl|pmum:103322148 1 272 + 272 Gaps:8 100.00 276 84.78 3e-165 cytochrome b-c1 complex subunit Rieske-4 mitochondrial-like
blastp_kegg lcl|pop:POPTR_0003s16060g 1 272 + 272 Gaps:6 100.00 272 85.66 2e-163 POPTRDRAFT_712114 ubiquinol-cytochrome C reductase iron-sulfur subunit family protein
blastp_kegg lcl|pop:POPTR_0001s12960g 1 272 + 272 Gaps:7 100.00 275 84.00 9e-162 POPTRDRAFT_708849 ubiquinol-cytochrome C reductase iron-sulfur subunit family protein
blastp_kegg lcl|fve:101304159 1 272 + 272 Gaps:10 100.00 280 82.86 2e-160 cytochrome b-c1 complex subunit Rieske-3 mitochondrial-like
blastp_kegg lcl|rcu:RCOM_1438410 1 272 + 272 Gaps:14 100.00 264 85.61 7e-158 ubiquinol-cytochrome C reductase iron-sulfur subunit putative (EC:1.10.2.2)
blastp_kegg lcl|pxb:103944762 1 272 + 272 Gaps:9 100.00 281 79.00 1e-152 cytochrome b-c1 complex subunit Rieske-4 mitochondrial-like
blastp_kegg lcl|vvi:100257494 1 272 + 272 Gaps:8 100.00 272 83.09 4e-152 cytochrome b-c1 complex subunit Rieske-2 mitochondrial-like
blastp_kegg lcl|mdm:103452493 1 272 + 272 Gaps:9 100.00 281 79.00 9e-152 cytochrome b-c1 complex subunit Rieske-4 mitochondrial-like
blastp_kegg lcl|mdm:103414499 1 272 + 272 Gaps:9 100.00 281 79.00 1e-151 cytochrome b-c1 complex subunit Rieske-4 mitochondrial-like
blastp_pdb 3cxh_P 109 272 + 164 Gaps:1 88.11 185 58.90 8e-69 mol:protein length:185 Cytochrome b-c1 complex subunit Rieske mitoc
blastp_pdb 3cxh_E 109 272 + 164 Gaps:1 88.11 185 58.90 8e-69 mol:protein length:185 Cytochrome b-c1 complex subunit Rieske mitoc
blastp_pdb 3cx5_P 109 272 + 164 Gaps:1 88.11 185 58.90 8e-69 mol:protein length:185 Cytochrome b-c1 complex subunit Rieske mitoc
blastp_pdb 3cx5_E 109 272 + 164 Gaps:1 88.11 185 58.90 8e-69 mol:protein length:185 Cytochrome b-c1 complex subunit Rieske mitoc
blastp_pdb 2ibz_E 109 272 + 164 Gaps:1 88.11 185 58.90 8e-69 mol:protein length:185 Ubiquinol-cytochrome c reductase iron-sulfur
blastp_pdb 1p84_E 109 272 + 164 Gaps:1 88.11 185 58.90 8e-69 mol:protein length:185 Ubiquinol-cytochrome C reductase iron-sulfur
blastp_pdb 1kyo_P 109 272 + 164 Gaps:1 88.11 185 58.90 8e-69 mol:protein length:185 UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR
blastp_pdb 1kyo_E 109 272 + 164 Gaps:1 88.11 185 58.90 8e-69 mol:protein length:185 UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR
blastp_pdb 1kb9_E 109 272 + 164 Gaps:1 88.11 185 58.90 8e-69 mol:protein length:185 UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR
blastp_pdb 1ezv_E 109 272 + 164 Gaps:1 88.11 185 58.90 8e-69 mol:protein length:185 UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR
blastp_uniprot_sprot sp|P51133|UCRI3_TOBAC 1 272 + 272 Gaps:4 100.00 268 77.61 3e-148 Cytochrome b-c1 complex subunit Rieske-3 mitochondrial OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P51135|UCRI5_TOBAC 1 272 + 272 Gaps:4 100.00 268 77.24 1e-147 Cytochrome b-c1 complex subunit Rieske-5 mitochondrial OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P51132|UCRI2_TOBAC 1 272 + 272 Gaps:8 100.00 272 78.31 3e-146 Cytochrome b-c1 complex subunit Rieske-2 mitochondrial OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P37841|UCRI_SOLTU 36 272 + 237 none 89.43 265 83.12 3e-144 Cytochrome b-c1 complex subunit Rieske mitochondrial OS Solanum tuberosum GN FES1 PE 1 SV 1
blastp_uniprot_sprot sp|P49729|UCRI1_TOBAC 53 272 + 220 none 85.27 258 86.82 7e-143 Cytochrome b-c1 complex subunit Rieske-1 mitochondrial (Fragment) OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P49727|UCRI_MAIZE 1 272 + 272 Gaps:5 100.00 273 75.46 6e-141 Cytochrome b-c1 complex subunit Rieske mitochondrial OS Zea mays PE 2 SV 1
blastp_uniprot_sprot sp|P51134|UCRI4_TOBAC 63 272 + 210 none 88.98 236 88.10 7e-138 Cytochrome b-c1 complex subunit Rieske-4 mitochondrial OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P07056|UCRI_NEUCR 111 272 + 162 none 70.13 231 59.88 3e-69 Cytochrome b-c1 complex subunit Rieske mitochondrial OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN NCU06606 PE 3 SV 1
blastp_uniprot_sprot sp|P08067|UCRI_YEAST 109 272 + 164 Gaps:1 75.81 215 58.90 4e-68 Cytochrome b-c1 complex subunit Rieske mitochondrial OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN RIP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5ZLR5|UCRI_CHICK 108 272 + 165 none 60.66 272 55.76 9e-66 Cytochrome b-c1 complex subunit Rieske mitochondrial OS Gallus gallus GN UQCRFS1 PE 1 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 132 272 141 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 93 143 51 PF02921 "KEGG:00190+1.10.2.2","MetaCyc:PWY-3781","MetaCyc:PWY-6692","MetaCyc:PWY-7082","MetaCyc:PWY-7279" Ubiquinol cytochrome reductase transmembrane region IPR004192
Gene3D 96 132 37 G3DSA:1.20.5.270 "KEGG:00190+1.10.2.2","MetaCyc:PWY-3781","MetaCyc:PWY-6692","MetaCyc:PWY-7082","MetaCyc:PWY-7279" none IPR004192
PRINTS 210 221 12 PR00162 none Rieske 2Fe-2S subunit signature IPR005805
PRINTS 244 256 13 PR00162 none Rieske 2Fe-2S subunit signature IPR005805
PRINTS 232 244 13 PR00162 none Rieske 2Fe-2S subunit signature IPR005805
SUPERFAMILY 83 145 63 SSF81502 none none none
ProSiteProfiles 182 270 89 PS51296 none Rieske [2Fe-2S] iron-sulfur domain profile. IPR017941
PANTHER 2 272 271 PTHR10134 none none IPR014349
Phobius 1 109 109 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 134 271 138 SSF50022 none none IPR017941
Gene3D 133 271 139 G3DSA:2.102.10.10 none none IPR017941
TIGRFAM 128 272 145 TIGR01416 "KEGG:00190+1.10.2.2","MetaCyc:PWY-3781","MetaCyc:PWY-6692","MetaCyc:PWY-7082","MetaCyc:PWY-7279" Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit IPR006317
Pfam 178 258 81 PF00355 none Rieske [2Fe-2S] domain IPR017941
Phobius 110 131 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 2 272 271 PTHR10134:SF1 none none none

1 Localization

Analysis Start End Length
TMHMM 110 132 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

0 Targeting