Protein : Qrob_P0476750.2 Q. robur
Protein Identifier  ? Qrob_P0476750.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) PTHR11730:SF6 - AMMONIUM TRANSPORTER Gene Prediction Quality  validated
Protein length 

Sequence

Length: 188  
Kegg Orthology  K03320
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008519 ammonium transmembrane transporter activity Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.
GO:0015696 ammonium transport The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.
GO:0072488 ammonium transmembrane transport The directed movement of ammonium across a membrane by means of some agent such as a transporter or pore. Ammonium is the cation NH4+.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10019808mg 5 186 + 182 Gaps:13 36.31 504 71.04 6e-78 hypothetical protein
blastp_kegg lcl|mdm:103414323 5 186 + 182 Gaps:13 36.31 504 69.95 1e-76 ammonium transporter 1 member 2-like
blastp_kegg lcl|tcc:TCM_026129 5 186 + 182 Gaps:3 35.88 510 68.85 1e-76 Ammonium transporter 1 2
blastp_kegg lcl|cit:102627368 5 186 + 182 Gaps:13 22.51 813 71.04 3e-76 ammonium transporter 1 member 2-like
blastp_kegg lcl|csv:101222356 5 186 + 182 Gaps:5 43.36 422 67.76 3e-75 ammonium transporter 1 member 2-like
blastp_kegg lcl|pper:PRUPE_ppa004450mg 5 186 + 182 Gaps:13 35.95 509 68.31 1e-74 hypothetical protein
blastp_kegg lcl|sot:102578704 5 186 + 182 Gaps:6 36.33 512 67.20 1e-74 ammonium transporter 1 member 2-like
blastp_kegg lcl|cmo:103485853 5 186 + 182 Gaps:3 35.81 511 67.21 2e-74 ammonium transporter 1 member 2-like
blastp_kegg lcl|cmo:103485850 6 186 + 181 Gaps:3 35.62 511 66.48 4e-74 ammonium transporter 1 member 2
blastp_kegg lcl|gmx:100797209 5 186 + 182 Gaps:3 36.24 505 66.67 9e-74 ammonium transporter 1 member 2-like
blastp_pdb 2ns1_A 43 185 + 143 Gaps:17 30.58 412 31.75 5e-09 mol:protein length:412 Ammonia channel
blastp_pdb 2nuu_F 43 185 + 143 Gaps:17 30.36 415 31.75 5e-09 mol:protein length:415 Ammonia channel
blastp_pdb 2nuu_E 43 185 + 143 Gaps:17 30.36 415 31.75 5e-09 mol:protein length:415 Ammonia channel
blastp_pdb 2nuu_D 43 185 + 143 Gaps:17 30.36 415 31.75 5e-09 mol:protein length:415 Ammonia channel
blastp_pdb 2nuu_C 43 185 + 143 Gaps:17 30.36 415 31.75 5e-09 mol:protein length:415 Ammonia channel
blastp_pdb 2nuu_B 43 185 + 143 Gaps:17 30.36 415 31.75 5e-09 mol:protein length:415 Ammonia channel
blastp_pdb 2nuu_A 43 185 + 143 Gaps:17 30.36 415 31.75 5e-09 mol:protein length:415 Ammonia channel
blastp_pdb 2npj_A 43 185 + 143 Gaps:17 29.72 424 31.75 5e-09 mol:protein length:424 Ammonia channel
blastp_pdb 2npg_A 43 185 + 143 Gaps:17 29.72 424 31.75 5e-09 mol:protein length:424 Ammonia channel
blastp_pdb 1xqf_A 43 185 + 143 Gaps:17 30.14 418 31.75 6e-09 mol:protein length:418 Probable ammonium transporter
blastp_uniprot_sprot sp|O04161|AMT12_SOLLC 5 186 + 182 Gaps:6 36.19 514 66.67 5e-74 Ammonium transporter 1 member 2 OS Solanum lycopersicum GN AMT1-2 PE 2 SV 1
blastp_uniprot_sprot sp|P54144|AMT11_ARATH 5 186 + 182 Gaps:13 36.53 501 66.67 5e-74 Ammonium transporter 1 member 1 OS Arabidopsis thaliana GN AMT1-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SQH9|AMT13_ARATH 5 186 + 182 Gaps:15 36.75 498 66.12 2e-72 Ammonium transporter 1 member 3 OS Arabidopsis thaliana GN AMT1-3 PE 2 SV 2
blastp_uniprot_sprot sp|P58905|AMT11_SOLLC 5 186 + 182 Gaps:16 37.30 488 65.38 2e-71 Ammonium transporter 1 member 1 OS Solanum lycopersicum GN AMT1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZPJ8|AMT12_ARATH 5 186 + 182 Gaps:14 35.80 514 64.13 3e-71 Ammonium transporter 1 member 2 OS Arabidopsis thaliana GN AMT1-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LK16|AMT15_ARATH 5 186 + 182 Gaps:14 36.69 496 63.74 8e-71 Putative ammonium transporter 1 member 5 OS Arabidopsis thaliana GN AMT1-5 PE 3 SV 1
blastp_uniprot_sprot sp|Q6K9G1|AMT12_ORYSJ 5 186 + 182 Gaps:14 37.10 496 65.22 2e-70 Ammonium transporter 1 member 2 OS Oryza sativa subsp. japonica GN AMT1-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SVT8|AMT14_ARATH 5 186 + 182 Gaps:5 36.71 504 62.16 5e-70 Ammonium transporter 1 member 4 OS Arabidopsis thaliana GN AMT1-4 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XQ12|AMT11_ORYSJ 5 186 + 182 Gaps:4 36.95 498 63.59 8e-69 Ammonium transporter 1 member 1 OS Oryza sativa subsp. japonica GN AMT1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6K9G3|AMT13_ORYSJ 9 186 + 178 Gaps:4 36.14 498 62.22 4e-67 Ammonium transporter 1 member 3 OS Oryza sativa subsp. japonica GN AMT1-3 PE 2 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 9 186 178 PTHR11730:SF6 none none none
Phobius 112 187 76 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 9 186 178 PF00909 none Ammonium Transporter Family IPR024041
Phobius 29 48 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 8 186 179 G3DSA:1.10.3430.10 none none IPR029020
Phobius 6 28 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 6 186 181 SSF111352 none none IPR024041
PANTHER 9 186 178 PTHR11730 none none IPR001905
Phobius 92 111 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 49 72 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 73 91 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

3 Localization

Analysis Start End Length
TMHMM 92 109 17
TMHMM 49 71 22
TMHMM 7 29 22

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting