Protein : Qrob_P0462530.2 Q. robur
Protein Identifier  ? Qrob_P0462530.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) K03028 - 26S proteasome regulatory subunit N1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 217  
Kegg Orthology  K03028
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0030234 enzyme regulator activity Binds to and modulates the activity of an enzyme.
GO:0000502 proteasome complex A large multisubunit complex which catalyzes protein degradation, found in eukaryotes, archaea and some bacteria. In eukaryotes, this complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core.
GO:0042176 regulation of protein catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103328445 22 216 + 195 none 64.78 301 89.23 1e-122 26S proteasome non-ATPase regulatory subunit 2 homolog A-like
blastp_kegg lcl|cam:101498643 14 216 + 203 none 22.91 886 87.68 9e-121 26S proteasome non-ATPase regulatory subunit 2 1A-like
blastp_kegg lcl|tcc:TCM_008190 22 216 + 195 none 22.03 885 91.79 5e-120 26S proteasome regulatory subunit S2 1A isoform 1
blastp_kegg lcl|mtr:MTR_4g078780 20 216 + 197 none 22.23 886 90.36 1e-119 26S proteasome non-ATPase regulatory subunit
blastp_kegg lcl|csv:101206940 22 216 + 195 none 21.76 896 88.72 3e-118 26S proteasome non-ATPase regulatory subunit 2 1A-like
blastp_kegg lcl|cmo:103495645 22 216 + 195 none 21.76 896 88.72 4e-118 26S proteasome non-ATPase regulatory subunit 2 homolog A
blastp_kegg lcl|gmx:100777078 7 216 + 210 Gaps:2 23.95 885 84.43 1e-117 26S proteasome non-ATPase regulatory subunit 2 homolog A-like
blastp_kegg lcl|pvu:PHAVU_011G124300g 14 216 + 203 none 22.94 885 86.21 7e-117 hypothetical protein
blastp_kegg lcl|vvi:100255701 22 216 + 195 none 21.91 890 89.23 1e-116 26S proteasome regulatory subunit N1-like
blastp_kegg lcl|gmx:100799779 7 216 + 210 Gaps:2 23.95 885 83.96 1e-116 26S proteasome non-ATPase regulatory subunit 2 homolog A-like
blastp_uniprot_sprot sp|Q9SIV2|PSD2A_ARATH 22 216 + 195 none 21.89 891 83.59 8e-110 26S proteasome non-ATPase regulatory subunit 2 homolog A OS Arabidopsis thaliana GN RPN1A PE 1 SV 2
blastp_uniprot_sprot sp|Q6XJG8|PSD2B_ARATH 22 216 + 195 none 21.89 891 79.49 4e-102 26S proteasome non-ATPase regulatory subunit 2 homolog B OS Arabidopsis thaliana GN RPN1B PE 1 SV 1
blastp_uniprot_sprot sp|P87048|RPN1_SCHPO 2 214 + 213 none 23.91 891 52.11 2e-64 26S proteasome regulatory subunit rpn1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN rpn1 PE 1 SV 2
blastp_uniprot_sprot sp|Q13200|PSMD2_HUMAN 10 214 + 205 Gaps:3 22.47 908 52.94 5e-64 26S proteasome non-ATPase regulatory subunit 2 OS Homo sapiens GN PSMD2 PE 1 SV 3
blastp_uniprot_sprot sp|Q5R9I6|PSMD2_PONAB 10 214 + 205 Gaps:3 22.47 908 52.45 8e-64 26S proteasome non-ATPase regulatory subunit 2 OS Pongo abelii GN PSMD2 PE 2 SV 1
blastp_uniprot_sprot sp|Q4FZT9|PSMD2_RAT 10 214 + 205 Gaps:3 22.47 908 52.94 2e-63 26S proteasome non-ATPase regulatory subunit 2 OS Rattus norvegicus GN Psmd2 PE 2 SV 1
blastp_uniprot_sprot sp|P56701|PSMD2_BOVIN 10 214 + 205 Gaps:3 22.47 908 52.45 3e-63 26S proteasome non-ATPase regulatory subunit 2 OS Bos taurus GN PSMD2 PE 1 SV 2
blastp_uniprot_sprot sp|Q8VDM4|PSMD2_MOUSE 10 214 + 205 Gaps:3 22.47 908 52.94 3e-63 26S proteasome non-ATPase regulatory subunit 2 OS Mus musculus GN Psmd2 PE 1 SV 1
blastp_uniprot_sprot sp|Q54BC6|PSMD2_DICDI 22 211 + 190 Gaps:1 21.16 893 55.03 1e-58 26S proteasome non-ATPase regulatory subunit 2 OS Dictyostelium discoideum GN psmD2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7S8R8|RPN1_NEUCR 5 213 + 209 Gaps:2 23.39 902 49.29 4e-57 26S proteasome regulatory subunit rpn-1 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN rpn-1 PE 3 SV 2
rpsblast_cdd gnl|CDD|34713 4 213 + 210 Gaps:2 23.84 881 47.62 6e-56 COG5110 RPN1 26S proteasome regulatory complex component [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37216 2 216 + 215 Gaps:2 24.26 878 66.20 6e-85 KOG2005 KOG2005 KOG2005 26S proteasome regulatory complex subunit RPN1/PSMD2 [Posttranslational modification protein turnover chaperones].

2 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 4 214 211 PTHR10943:SF1 none none IPR016643
PANTHER 4 214 211 PTHR10943 none none none

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting