Protein : Qrob_P0462460.2 Q. robur
Protein Identifier  ? Qrob_P0462460.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) K00815 - tyrosine aminotransferase [EC:2.6.1.5] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 420  
Kegg Orthology  K00815
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0008483 transaminase activity Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0006520 cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100253895 5 419 + 415 Gaps:2 99.52 419 68.35 0.0 tyrosine aminotransferase-like
blastp_kegg lcl|fve:101305385 7 419 + 413 none 90.57 456 71.19 0.0 tyrosine aminotransferase-like
blastp_kegg lcl|cic:CICLE_v10015356mg 5 419 + 415 Gaps:2 98.34 422 69.40 0.0 hypothetical protein
blastp_kegg lcl|cit:102611153 5 419 + 415 Gaps:2 98.34 422 69.40 0.0 tyrosine aminotransferase-like
blastp_kegg lcl|tcc:TCM_008178 1 419 + 419 Gaps:1 88.61 474 67.14 0.0 Tyrosine transaminase family protein isoform 1
blastp_kegg lcl|pmum:103328397 5 419 + 415 Gaps:7 99.53 424 69.43 0.0 probable aminotransferase TAT2
blastp_kegg lcl|tcc:TCM_008169 5 419 + 415 Gaps:1 99.52 418 66.59 0.0 Tyrosine transaminase family protein
blastp_kegg lcl|pop:POPTR_0017s04590g 5 417 + 413 Gaps:1 99.04 418 68.36 0.0 hypothetical protein
blastp_kegg lcl|pxb:103945452 3 418 + 416 Gaps:4 98.59 426 70.71 0.0 probable aminotransferase TAT2
blastp_kegg lcl|vvi:100247148 6 419 + 414 Gaps:1 99.05 419 66.51 0.0 tyrosine aminotransferase-like
blastp_pdb 3pdx_A 25 415 + 391 Gaps:13 96.02 402 37.31 3e-85 mol:protein length:402 Tyrosine aminotransferase
blastp_pdb 3dyd_B 25 415 + 391 Gaps:13 90.40 427 36.01 4e-82 mol:protein length:427 Tyrosine aminotransferase
blastp_pdb 3dyd_A 25 415 + 391 Gaps:13 90.40 427 36.01 4e-82 mol:protein length:427 Tyrosine aminotransferase
blastp_pdb 1bw0_B 42 416 + 375 Gaps:13 91.83 416 34.03 2e-59 mol:protein length:416 PROTEIN (TYROSINE AMINOTRANSFERASE)
blastp_pdb 1bw0_A 42 416 + 375 Gaps:13 91.83 416 34.03 2e-59 mol:protein length:416 PROTEIN (TYROSINE AMINOTRANSFERASE)
blastp_pdb 1xi9_D 77 418 + 342 Gaps:10 82.76 406 27.38 9e-36 mol:protein length:406 putative transaminase
blastp_pdb 1xi9_C 77 418 + 342 Gaps:10 82.76 406 27.38 9e-36 mol:protein length:406 putative transaminase
blastp_pdb 1xi9_B 77 418 + 342 Gaps:10 82.76 406 27.38 9e-36 mol:protein length:406 putative transaminase
blastp_pdb 1xi9_A 77 418 + 342 Gaps:10 82.76 406 27.38 9e-36 mol:protein length:406 putative transaminase
blastp_pdb 1v2f_B 55 352 + 298 Gaps:33 73.75 381 31.67 1e-25 mol:protein length:381 Glutamine Aminotransferase
blastp_uniprot_sprot sp|Q9FN30|TAT2_ARATH 15 419 + 405 Gaps:3 98.55 414 57.84 2e-176 Probable aminotransferase TAT2 OS Arabidopsis thaliana GN At5g53970 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVY1|TAT_ARATH 5 419 + 415 Gaps:3 99.05 420 56.49 5e-174 Tyrosine aminotransferase OS Arabidopsis thaliana GN TAT PE 2 SV 1
blastp_uniprot_sprot sp|Q9ST03|NAATB_HORVU 9 418 + 410 Gaps:5 75.32 551 54.22 2e-162 Nicotianamine aminotransferase B OS Hordeum vulgare GN naat-B PE 1 SV 2
blastp_uniprot_sprot sp|Q9SIV0|SUR1_ARATH 5 418 + 414 Gaps:2 90.04 462 52.40 7e-160 S-alkyl-thiohydroximate lyase SUR1 OS Arabidopsis thaliana GN SUR1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ST02|NAATA_HORVU 5 418 + 414 Gaps:10 91.97 461 53.54 3e-159 Nicotianamine aminotransferase A OS Hordeum vulgare GN naat-A PE 1 SV 2
blastp_uniprot_sprot sp|Q67Y55|TAT1_ARATH 10 418 + 409 Gaps:1 91.31 449 53.17 4e-152 Probable aminotransferase TAT1 OS Arabidopsis thaliana GN At4g28420 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SK47|TAT3_ARATH 10 416 + 407 Gaps:2 91.91 445 48.66 4e-137 Probable aminotransferase TAT3 OS Arabidopsis thaliana GN TAT3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYP2|TAT4_ARATH 5 416 + 412 Gaps:6 95.75 424 44.33 2e-116 Probable aminotransferase TAT4 OS Arabidopsis thaliana GN At4g23590 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SUR6|CORI3_ARATH 10 419 + 410 Gaps:6 95.73 422 43.81 5e-116 Cystine lyase CORI3 OS Arabidopsis thaliana GN CORI3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8QZR1|ATTY_MOUSE 25 415 + 391 Gaps:13 85.02 454 37.31 3e-84 Tyrosine aminotransferase OS Mus musculus GN Tat PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 60 407 348 PF00155 none Aminotransferase class I and II IPR004839
Gene3D 67 297 231 G3DSA:3.40.640.10 none none IPR015421
TIGRFAM 10 416 407 TIGR01265 none tyr_nico_aTase: tyrosine/nicotianamine family aminotransferase IPR005958
PANTHER 1 414 414 PTHR11751:SF322 none none none
PANTHER 1 414 414 PTHR11751 none none none
Gene3D 298 417 120 G3DSA:3.90.1150.10 none none IPR015422
PIRSF 2 419 418 PIRSF000517 none none IPR005958
SUPERFAMILY 30 414 385 SSF53383 none none IPR015424

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting