Protein : Qrob_P0457830.2 Q. robur
Protein Identifier  ? Qrob_P0457830.2 Organism . Name  Quercus robur
Score  57.9 Score Type  egn
Protein Description  (M=4) PTHR22951//PTHR22951:SF13 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED (PTHR22951:SF13) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 647  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005545 1-phosphatidylinositol binding Interacting selectively and non-covalently with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.
GO:0030136 clathrin-coated vesicle A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes.
GO:0030276 clathrin binding Interacting selectively and non-covalently with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.
GO:0048268 clathrin coat assembly The process that results in the assembly of clathrin triskelia into the ordered structure known as a clathrin cage.
GO:0005543 phospholipid binding Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103954986 1 643 + 643 Gaps:152 99.61 762 49.28 0.0 clathrin coat assembly protein AP180
blastp_kegg lcl|vvi:100246581 1 643 + 643 Gaps:78 98.98 591 62.39 0.0 clathrin coat assembly protein AP180-like
blastp_kegg lcl|rcu:RCOM_1119190 1 643 + 643 Gaps:106 99.53 634 59.43 0.0 clathrin assembly protein putative (EC:1.3.1.74)
blastp_kegg lcl|cam:101507095 1 646 + 646 Gaps:131 100.00 717 49.37 0.0 clathrin coat assembly protein AP180-like
blastp_kegg lcl|pmum:103329368 1 643 + 643 Gaps:108 95.40 847 50.87 0.0 clathrin coat assembly protein AP180
blastp_kegg lcl|pop:POPTR_0002s21710g 1 643 + 643 Gaps:73 99.50 599 61.24 0.0 POPTRDRAFT_552737 POPTRDRAFT_755856 clathrin assembly family protein
blastp_kegg lcl|mdm:103429092 1 644 + 644 Gaps:112 99.74 773 51.88 0.0 clathrin coat assembly protein AP180-like
blastp_kegg lcl|mdm:103404957 1 643 + 643 Gaps:92 88.50 852 53.05 0.0 clathrin coat assembly protein AP180
blastp_kegg lcl|cmo:103491352 1 643 + 643 Gaps:103 99.48 573 62.28 0.0 clathrin coat assembly protein AP180
blastp_kegg lcl|pper:PRUPE_ppa026885mg 1 513 + 513 Gaps:35 93.80 548 62.06 0.0 hypothetical protein
blastp_pdb 3zyk_B 36 312 + 277 Gaps:20 86.82 296 21.01 1e-10 mol:protein length:296 PHOSPHATIDYLINOSITOL-BINDING CLATHRIN ASSEMBL
blastp_pdb 3zyk_A 36 312 + 277 Gaps:20 86.82 296 21.01 1e-10 mol:protein length:296 PHOSPHATIDYLINOSITOL-BINDING CLATHRIN ASSEMBL
blastp_pdb 1hg5_A 36 312 + 277 Gaps:20 88.93 289 21.01 1e-10 mol:protein length:289 CLATHRIN ASSEMBLY PROTEIN SHORT FORM
blastp_pdb 1hg2_A 36 312 + 277 Gaps:20 88.93 289 21.01 1e-10 mol:protein length:289 CLATHRIN ASSEMBLY PROTEIN SHORT FORM
blastp_pdb 1hfa_A 36 312 + 277 Gaps:20 88.93 289 21.01 1e-10 mol:protein length:289 CLATHRIN ASSEMBLY PROTEIN SHORT FORM
blastp_pdb 1hf8_A 36 312 + 277 Gaps:20 88.93 289 21.01 1e-10 mol:protein length:289 CLATHRIN ASSEMBLY PROTEIN SHORT FORM
blastp_pdb 3zym_C 36 290 + 255 Gaps:19 76.13 310 21.19 3e-10 mol:protein length:310 PHOSPHATIDYLINOSITOL-BINDING CLATHRIN ASSEMBL
blastp_pdb 3zym_B 36 290 + 255 Gaps:19 76.13 310 21.19 3e-10 mol:protein length:310 PHOSPHATIDYLINOSITOL-BINDING CLATHRIN ASSEMBL
blastp_pdb 3zym_A 36 290 + 255 Gaps:19 76.13 310 21.19 3e-10 mol:protein length:310 PHOSPHATIDYLINOSITOL-BINDING CLATHRIN ASSEMBL
blastp_pdb 3zyl_B 36 290 + 255 Gaps:19 87.08 271 21.19 4e-10 mol:protein length:271 PHOSPHATIDYLINOSITOL-BINDING CLATHRIN ASSEMBL
blastp_uniprot_sprot sp|Q9ZVN6|AP180_ARATH 1 643 + 643 Gaps:95 99.54 653 51.38 0.0 Clathrin coat assembly protein AP180 OS Arabidopsis thaliana GN AP180 PE 1 SV 1
blastp_uniprot_sprot sp|Q8S9J8|CAP1_ARATH 1 315 + 315 Gaps:43 56.06 635 43.26 3e-91 Probable clathrin assembly protein At4g32285 OS Arabidopsis thaliana GN At4g32285 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SA65|CAP4_ARATH 3 318 + 316 Gaps:9 54.26 599 38.77 1e-80 Putative clathrin assembly protein At1g03050 OS Arabidopsis thaliana GN At1g03050 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GX47|CAP3_ARATH 3 321 + 319 Gaps:14 54.50 611 39.04 3e-78 Putative clathrin assembly protein At4g02650 OS Arabidopsis thaliana GN At4g02650 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LBH2|CAP8_ARATH 6 314 + 309 Gaps:11 52.89 571 38.41 3e-63 Putative clathrin assembly protein At2g01600 OS Arabidopsis thaliana GN At2g01600 PE 2 SV 2
blastp_uniprot_sprot sp|P94017|CAP9_ARATH 6 314 + 309 Gaps:13 43.64 692 36.75 2e-60 Putative clathrin assembly protein At1g14910 OS Arabidopsis thaliana GN At1g14910 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LVD8|CAP7_ARATH 3 314 + 312 Gaps:16 51.44 591 37.83 3e-59 Putative clathrin assembly protein At5g57200 OS Arabidopsis thaliana GN At5g57200 PE 3 SV 1
blastp_uniprot_sprot sp|Q8VYT2|CAP6_ARATH 5 314 + 310 Gaps:14 51.58 601 37.42 1e-58 Putative clathrin assembly protein At4g25940 OS Arabidopsis thaliana GN At4g25940 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LHS0|CAP10_ARATH 5 314 + 310 Gaps:26 53.68 544 36.99 8e-55 Putative clathrin assembly protein At5g35200 OS Arabidopsis thaliana GN At5g35200 PE 1 SV 1
blastp_uniprot_sprot sp|Q8LF20|CAP2_ARATH 1 315 + 315 Gaps:1 44.41 653 50.69 1e-47 Putative clathrin assembly protein At2g25430 OS Arabidopsis thaliana GN At2g25430 PE 1 SV 2

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 183 311 129 SSF89009 none none none
SUPERFAMILY 31 153 123 SSF48464 none none IPR008942
Gene3D 31 153 123 G3DSA:1.25.40.90 none none IPR008942
Gene3D 192 316 125 G3DSA:1.20.58.150 none none IPR014712
SMART 30 160 131 SM00273 none Epsin N-terminal homology (ENTH) domain IPR013809
PANTHER 3 489 487 PTHR22951 none none none
PANTHER 619 642 24 PTHR22951 none none none
ProSiteProfiles 24 160 137 PS50942 none ENTH domain profile. IPR013809
PANTHER 3 489 487 PTHR22951:SF13 none none none
PANTHER 619 642 24 PTHR22951:SF13 none none none
Pfam 30 314 285 PF07651 none ANTH domain IPR011417

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting