3 GO Terms
| Identifier | Name | Description |
|---|---|---|
| GO:0005507 | copper ion binding | Interacting selectively and non-covalently with copper (Cu) ions. |
| GO:0048038 | quinone binding | Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds. |
| GO:0009308 | amine metabolic process | The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. |
12 Blast
| Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
|---|---|---|---|---|---|---|---|---|---|---|---|
| blastp_kegg | lcl|cic:CICLE_v10022133mg | 1 | 232 | + | 232 | Gaps:43 | 85.14 | 222 | 68.25 | 5e-78 | hypothetical protein |
| blastp_kegg | lcl|cit:102627947 | 1 | 232 | + | 232 | Gaps:45 | 83.86 | 223 | 68.45 | 3e-75 | protein DCL chloroplastic-like |
| blastp_kegg | lcl|fve:101304576 | 1 | 232 | + | 232 | Gaps:36 | 89.91 | 218 | 62.76 | 1e-72 | uncharacterized protein LOC101304576 |
| blastp_kegg | lcl|vvi:100255290 | 1 | 232 | + | 232 | Gaps:32 | 87.66 | 235 | 64.56 | 3e-72 | uncharacterized LOC100255290 |
| blastp_kegg | lcl|pmum:103338509 | 1 | 232 | + | 232 | Gaps:39 | 88.94 | 226 | 65.67 | 5e-71 | protein DCL chloroplastic |
| blastp_kegg | lcl|pper:PRUPE_ppa011021mg | 1 | 232 | + | 232 | Gaps:39 | 88.94 | 226 | 65.17 | 7e-71 | hypothetical protein |
| blastp_kegg | lcl|csv:101228008 | 1 | 232 | + | 232 | Gaps:30 | 88.79 | 232 | 59.22 | 4e-70 | uncharacterized LOC101228008 |
| blastp_kegg | lcl|tcc:TCM_014003 | 1 | 234 | + | 234 | Gaps:48 | 89.78 | 225 | 64.36 | 9e-70 | hypothetical protein |
| blastp_kegg | lcl|mdm:103415277 | 81 | 232 | + | 152 | Gaps:14 | 60.00 | 230 | 79.71 | 1e-68 | protein DCL chloroplastic-like |
| blastp_kegg | lcl|mdm:103455355 | 81 | 232 | + | 152 | Gaps:14 | 60.00 | 230 | 79.71 | 2e-68 | protein DCL chloroplastic-like |
| blastp_uniprot_sprot | sp|Q42463|DCL_SOLLC | 156 | 216 | + | 61 | Gaps:1 | 27.68 | 224 | 41.94 | 2e-07 | Protein DCL chloroplastic OS Solanum lycopersicum GN DCL PE 2 SV 1 |
| rpsblast_cdd | gnl|CDD|204673 | 138 | 212 | + | 75 | Gaps:1 | 100.00 | 76 | 38.16 | 3e-21 | pfam11523 DUF3223 Protein of unknown function (DUF3223). This family of proteins has no known function. |
7 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Bourran1_2004_QTL5_peak_Bud_burst_A4 | Qrob_Chr10 | 10 | s_1C8OKQ_688 | v_12844_707 | 25,6 | 13,9 | 39,9 | lod | 2,7 | 6,1 |
| Bourran2_2002_QTL13_peak_Bud_burst_3P | Qrob_Chr10 | 10 | s_1B1AG7_637 | s_1A3A1N_709 | 19,44 | 0 | 49,44 | lod | 3 | 5,6 |
| Bourran2_2002_QTL15_peak_Bud_burst_A4 | Qrob_Chr10 | 10 | v_7579_71 | s_1ATZMJ_189 | 23,94 | 0 | 43,64 | lod | 3,7 | 5,4 |
| Bourran2_2014_vSeqBC_3P | Qrob_Chr10 | 10 | s_1A6CK6_610 | v_7092_29 | 4,28 | 0 | 23,27 | lod | 2,8619 | 7 |
| Bourran2_2014_vSeqBC_A4 | Qrob_Chr10 | 10 | s_1BAM4E_1326 | s_1C0HD0_1012 | 36,88 | 7,71 | 46,03 | lod | 2,6164 | 7,3 |
| Champenoux_2015_nPriLBD_3P | Qrob_Chr10 | 10 | v_15000_157 | v_15000_310 | 15,68 | 15,9 | 15,91 | lod | 2.4 | 5.5 |
| PM_1999_QTL16_peak_Bud_burst_3P | Qrob_Chr10 | 10 | s_1B6YNI_505 | s_1A1ZO_1322 | 7,48 | 0 | 31,48 | lod | 4 | 7,1 |
