Protein : Qrob_P0437620.2 Q. robur
Protein Identifier  ? Qrob_P0437620.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 1.4.3.5 - Pyridoxal 5'-phosphate synthase. Code Enzyme  EC:1.4.3.5
Gene Prediction Quality  validated Protein length 

Sequence

Length: 91  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0010181 FMN binding Interacting selectively and non-covalently with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_005113 1 90 + 90 Gaps:1 45.96 198 74.73 3e-39 Pyridoxamine 5'-phosphate oxidase family protein isoform 1
blastp_kegg lcl|vvi:100246846 1 90 + 90 Gaps:1 46.19 197 72.53 2e-38 pyridoxine/pyridoxamine 5'-phosphate oxidase-like
blastp_kegg lcl|pop:POPTR_0014s09620g 1 90 + 90 Gaps:1 46.19 197 71.43 5e-36 POPTRDRAFT_824039 pyridoxine 5'-phosphate oxidase-related family protein
blastp_kegg lcl|pop:POPTR_0002s17450g 1 90 + 90 Gaps:1 45.73 199 68.13 1e-35 POPTRDRAFT_644606 pyridoxine 5'-phosphate oxidase-related family protein
blastp_kegg lcl|rcu:RCOM_0716430 1 90 + 90 Gaps:1 39.06 233 69.23 1e-35 hypothetical protein
blastp_kegg lcl|fve:101306166 1 90 + 90 Gaps:1 45.50 200 70.33 2e-34 pyridoxine/pyridoxamine 5'-phosphate oxidase 2-like
blastp_kegg lcl|pmum:103332181 1 90 + 90 Gaps:1 45.50 200 69.23 6e-34 pyridoxine/pyridoxamine 5'-phosphate oxidase 2
blastp_kegg lcl|pper:PRUPE_ppa011702mg 1 90 + 90 Gaps:1 45.50 200 69.23 1e-33 hypothetical protein
blastp_kegg lcl|brp:103866285 1 90 + 90 Gaps:1 45.96 198 59.34 1e-32 pyridoxine/pyridoxamine 5'-phosphate oxidase 2
blastp_kegg lcl|pxb:103964233 1 90 + 90 Gaps:1 45.50 200 62.64 2e-31 pyridoxine/pyridoxamine 5'-phosphate oxidase 2
blastp_pdb 2i51_B 4 90 + 87 Gaps:9 44.10 195 39.53 1e-08 mol:protein length:195 Uncharacterized conserved protein of COG5135
blastp_pdb 2i51_A 4 90 + 87 Gaps:9 44.10 195 39.53 1e-08 mol:protein length:195 Uncharacterized conserved protein of COG5135
blastp_uniprot_sprot sp|Q9ZPY1|PPOX2_ARATH 1 90 + 90 Gaps:1 45.96 198 59.34 1e-30 Pyridoxine/pyridoxamine 5'-phosphate oxidase 2 OS Arabidopsis thaliana GN PPOX2 PE 1 SV 2
rpsblast_cdd gnl|CDD|188541 5 90 + 86 Gaps:5 44.86 185 31.33 6e-07 TIGR04026 PPOX_FMN_cyano PPOX class probable FMN-dependent enzyme alr4036 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily described here is widespread in Cyanobacteria and plants and is named for alr4036 from Nostoc sp. PCC 7120. The family consists mostly of proteins from species that lack the capability to synthesize F420 so it is probable that all members bind FMN rather than F420.
rpsblast_kog gnl|CDD|39758 7 90 + 84 Gaps:2 32.67 251 26.83 4e-10 KOG4558 KOG4558 KOG4558 Uncharacterized conserved protein [Function unknown].

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 3 90 88 G3DSA:2.30.110.10 none none IPR012349

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting