Protein : Qrob_P0425540.2 Q. robur
Protein Identifier  ? Qrob_P0425540.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=52) PTHR11945 - MADS BOX PROTEIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 217  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0046983 protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
GO:0005750 mitochondrial respiratory chain complex III A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains about 10 polypeptide subunits including four redox centers: cytochrome b/b6, cytochrome c1 and an 2Fe-2S cluster. Catalyzes the oxidation of ubiquinol by oxidized cytochrome c1.
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101507150 1 215 + 215 Gaps:4 100.00 219 61.64 8e-86 agamous-like MADS-box protein AGL61-like
blastp_kegg lcl|pop:POPTR_0009s08740g 1 214 + 214 Gaps:2 98.62 217 61.21 2e-83 POPTRDRAFT_557554 hypothetical protein
blastp_kegg lcl|cam:101512320 1 215 + 215 Gaps:4 100.00 219 59.82 2e-76 agamous-like MADS-box protein AGL61-like
blastp_kegg lcl|rcu:RCOM_1382320 2 205 + 204 Gaps:4 89.38 226 61.39 5e-76 mads box protein putative
blastp_kegg lcl|vvi:100242931 7 213 + 207 Gaps:10 95.79 214 60.98 8e-76 agamous-like MADS-box protein AGL62
blastp_kegg lcl|mtr:MTR_3g080940 1 212 + 212 Gaps:7 99.03 207 58.05 1e-75 Agamous-like MADS-box protein AGL62
blastp_kegg lcl|gmx:100781526 7 215 + 209 Gaps:15 96.71 213 59.71 8e-74 agamous-like MADS-box protein AGL62-like
blastp_kegg lcl|pvu:PHAVU_007G048000g 7 215 + 209 Gaps:11 96.86 223 55.56 9e-74 hypothetical protein
blastp_kegg lcl|tcc:TCM_006324 4 214 + 211 Gaps:7 85.60 243 55.77 2e-72 Agamous-like MADS-box protein A putative
blastp_kegg lcl|pper:PRUPE_ppa017246mg 1 213 + 213 Gaps:28 97.90 238 54.08 5e-72 hypothetical protein
blastp_pdb 3p57_J 9 93 + 85 Gaps:1 95.56 90 37.21 2e-15 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_I 9 93 + 85 Gaps:1 95.56 90 37.21 2e-15 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_D 9 93 + 85 Gaps:1 95.56 90 37.21 2e-15 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_C 9 93 + 85 Gaps:1 95.56 90 37.21 2e-15 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_B 9 93 + 85 Gaps:1 95.56 90 37.21 2e-15 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_A 9 93 + 85 Gaps:1 95.56 90 37.21 2e-15 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3kov_J 9 93 + 85 Gaps:1 95.56 90 37.21 2e-15 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3kov_I 9 93 + 85 Gaps:1 95.56 90 37.21 2e-15 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3kov_B 9 93 + 85 Gaps:1 95.56 90 37.21 2e-15 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3kov_A 9 93 + 85 Gaps:1 95.56 90 37.21 2e-15 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_uniprot_sprot sp|Q4PSU4|AGL61_ARATH 7 213 + 207 Gaps:21 75.76 264 48.00 4e-51 Agamous-like MADS-box protein AGL61 OS Arabidopsis thaliana GN AGL61 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FKK2|AGL62_ARATH 7 176 + 170 Gaps:5 57.86 299 50.87 7e-50 Agamous-like MADS-box protein AGL62 OS Arabidopsis thaliana GN AGL62 PE 1 SV 1
blastp_uniprot_sprot sp|Q9XJ66|MAD22_ORYSJ 8 166 + 159 Gaps:7 70.18 228 32.50 1e-17 MADS-box transcription factor 22 OS Oryza sativa subsp. japonica GN MADS22 PE 2 SV 1
blastp_uniprot_sprot sp|O82743|AGL19_ARATH 8 172 + 165 Gaps:11 76.71 219 35.12 4e-17 Agamous-like MADS-box protein AGL19 OS Arabidopsis thaliana GN AGL19 PE 1 SV 1
blastp_uniprot_sprot sp|Q0D4T4|MAD18_ORYSJ 8 173 + 166 Gaps:26 60.24 249 38.67 5e-17 MADS-box transcription factor 18 OS Oryza sativa subsp. japonica GN MADS18 PE 1 SV 1
blastp_uniprot_sprot sp|A2YNI2|MAD18_ORYSI 8 173 + 166 Gaps:26 60.24 249 38.67 5e-17 MADS-box transcription factor 18 OS Oryza sativa subsp. indica GN MADS18 PE 2 SV 2
blastp_uniprot_sprot sp|Q69TG5|MAD55_ORYSJ 20 89 + 70 none 28.57 245 51.43 7e-17 MADS-box transcription factor 55 OS Oryza sativa subsp. japonica GN MADS55 PE 2 SV 2
blastp_uniprot_sprot sp|Q39371|3AP1_BRAOL 8 173 + 166 Gaps:26 58.59 256 39.33 7e-17 Floral homeotic protein APETALA 1 OS Brassica oleracea GN AP1 PE 2 SV 1
blastp_uniprot_sprot sp|O64645|SOC1_ARATH 8 77 + 70 none 32.71 214 48.57 8e-17 MADS-box protein SOC1 OS Arabidopsis thaliana GN SOC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6Z6W2|MAD57_ORYSJ 8 210 + 203 Gaps:17 84.65 241 30.39 1e-16 MADS-box transcription factor 57 OS Oryza sativa subsp. japonica GN MADS57 PE 2 SV 2

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 8 68 61 PS50066 "Reactome:REACT_21303" MADS-box domain profile. IPR002100
PRINTS 30 45 16 PR00404 "Reactome:REACT_21303" MADS domain signature IPR002100
PRINTS 45 66 22 PR00404 "Reactome:REACT_21303" MADS domain signature IPR002100
PRINTS 10 30 21 PR00404 "Reactome:REACT_21303" MADS domain signature IPR002100
PANTHER 8 177 170 PTHR11945 none none none
SUPERFAMILY 8 78 71 SSF55455 "Reactome:REACT_21303" none IPR002100
Pfam 18 64 47 PF00319 "Reactome:REACT_21303" SRF-type transcription factor (DNA-binding and dimerisation domain) IPR002100
SMART 8 67 60 SM00432 "Reactome:REACT_21303" none IPR002100
Gene3D 85 125 41 G3DSA:1.10.1090.10 none none IPR003197
Coils 141 169 29 Coil none none none

0 Localization

0 Qtllist

0 Targeting