Protein : Qrob_P0417820.2 Q. robur
Protein Identifier  ? Qrob_P0417820.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=50) K01051 - pectinesterase [EC:3.1.1.11] Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 501  
Kegg Orthology  K01051
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103490630 4 498 + 495 Gaps:10 86.28 576 51.91 1e-170 pectinesterase/pectinesterase inhibitor PPE8B-like
blastp_kegg lcl|vvi:100233113 31 499 + 469 Gaps:18 90.96 531 53.00 3e-170 pectin methylesterase PME1
blastp_kegg lcl|csv:101207185 31 498 + 468 Gaps:8 92.31 507 53.63 1e-169 pectinesterase/pectinesterase inhibitor PPE8B-like
blastp_kegg lcl|mdm:103400887 21 498 + 478 Gaps:8 94.70 509 52.90 3e-169 pectinesterase/pectinesterase inhibitor PPE8B
blastp_kegg lcl|pxb:103950217 21 498 + 478 Gaps:8 94.70 509 52.49 1e-167 PME4 pectinesterase/pectinesterase inhibitor PPE8B-like
blastp_kegg lcl|pper:PRUPE_ppa004300mg 31 494 + 464 Gaps:8 90.52 517 53.85 2e-167 hypothetical protein
blastp_kegg lcl|sot:102587467 1 499 + 499 Gaps:42 99.81 538 48.23 4e-167 pectinesterase/pectinesterase inhibitor PPE8B-like
blastp_kegg lcl|pmum:103340502 31 494 + 464 Gaps:8 90.52 517 53.21 9e-167 pectinesterase/pectinesterase inhibitor PPE8B
blastp_kegg lcl|tcc:TCM_037443 31 499 + 469 Gaps:34 92.24 541 51.10 2e-166 Pectinesterase/pectinesterase inhibitor PPE8B
blastp_kegg lcl|cic:CICLE_v10007993mg 31 498 + 468 Gaps:27 93.14 525 51.53 3e-166 hypothetical protein
blastp_pdb 1xg2_A 186 498 + 313 Gaps:2 99.37 317 49.21 1e-103 mol:protein length:317 Pectinesterase 1
blastp_pdb 1gq8_A 182 498 + 317 Gaps:2 100.00 319 49.84 4e-102 mol:protein length:319 PECTINESTERASE
blastp_pdb 2ntq_B 192 489 + 298 Gaps:74 97.66 342 32.93 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 192 489 + 298 Gaps:74 97.66 342 32.93 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 192 489 + 298 Gaps:74 97.66 342 32.93 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 192 489 + 298 Gaps:74 97.66 342 32.93 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 192 489 + 298 Gaps:74 97.66 342 32.93 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 192 489 + 298 Gaps:74 97.66 342 32.93 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 1qjv_B 192 489 + 298 Gaps:74 97.66 342 32.93 6e-27 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 192 489 + 298 Gaps:74 97.66 342 32.93 6e-27 mol:protein length:342 PECTIN METHYLESTERASE
blastp_uniprot_sprot sp|Q43062|PME_PRUPE 31 494 + 464 Gaps:8 89.66 522 53.63 4e-168 Pectinesterase/pectinesterase inhibitor PPE8B OS Prunus persica PE 2 SV 1
blastp_uniprot_sprot sp|Q9SMY7|PME44_ARATH 3 498 + 496 Gaps:40 99.43 525 48.85 6e-161 Probable pectinesterase/pectinesterase inhibitor 44 OS Arabidopsis thaliana GN PME44 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LXK7|PME32_ARATH 2 499 + 498 Gaps:24 98.29 527 47.49 9e-158 Probable pectinesterase/pectinesterase inhibitor 32 OS Arabidopsis thaliana GN PME32 PE 2 SV 1
blastp_uniprot_sprot sp|Q96575|PME22_SOLLC 4 498 + 495 Gaps:55 94.91 550 41.19 2e-122 Pectinesterase 2.2 OS Solanum lycopersicum GN PME2.2 PE 3 SV 1
blastp_uniprot_sprot sp|Q8RXK7|PME41_ARATH 72 499 + 428 Gaps:54 83.07 573 43.28 3e-121 Probable pectinesterase/pectinesterase inhibitor 41 OS Arabidopsis thaliana GN PME41 PE 2 SV 2
blastp_uniprot_sprot sp|P14280|PME1_SOLLC 4 498 + 495 Gaps:35 94.87 546 41.12 7e-121 Pectinesterase 1 OS Solanum lycopersicum GN PME1.9 PE 1 SV 5
blastp_uniprot_sprot sp|Q9M9W7|PME22_ARATH 72 498 + 427 Gaps:34 80.48 543 46.00 1e-120 Putative pectinesterase/pectinesterase inhibitor 22 OS Arabidopsis thaliana GN PME22 PE 3 SV 1
blastp_uniprot_sprot sp|O04887|PME2_CITSI 31 498 + 468 Gaps:19 89.61 510 44.86 2e-119 Pectinesterase 2 OS Citrus sinensis GN PECS-2.1 PE 2 SV 1
blastp_uniprot_sprot sp|P09607|PME21_SOLLC 4 498 + 495 Gaps:55 94.91 550 40.04 5e-119 Pectinesterase 2.1 OS Solanum lycopersicum GN PME2.1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SRX4|PME7_ARATH 72 499 + 428 Gaps:64 83.94 579 41.77 7e-118 Probable pectinesterase/pectinesterase inhibitor 7 OS Arabidopsis thaliana GN PME7 PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 12 156 145 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Gene3D 187 494 308 G3DSA:2.160.20.10 none none IPR012334
Phobius 24 500 477 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 41 162 122 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 41 500 460 PTHR31707:SF1 none none none
Pfam 189 483 295 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
SUPERFAMILY 186 496 311 SSF51126 none none IPR011050
PANTHER 41 500 460 PTHR31707 none none none
ProSitePatterns 214 233 20 PS00800 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 1. IPR018040
Pfam 41 155 115 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 39 159 121 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
ProSitePatterns 333 342 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
Phobius 16 23 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_EUK 1 23 22
SignalP_GRAM_POSITIVE 1 25 24
SignalP_GRAM_NEGATIVE 1 22 21

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

0 Targeting