Protein : Qrob_P0416130.2 Q. robur
Protein Identifier  ? Qrob_P0416130.2 Organism . Name  Quercus robur
Score  67.5 Score Type  egn
Protein Description  (M=5) K00600 - glycine hydroxymethyltransferase [EC:2.1.2.1] Code Enzyme  EC:2.1.2.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 240  
Kegg Orthology  K00600
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016740 transferase activity Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103344066 27 239 + 213 Gaps:37 85.02 207 85.23 6e-96 serine hydroxymethyltransferase 3 chloroplastic-like
blastp_kegg lcl|pmum:103343996 3 239 + 237 Gaps:50 41.01 456 82.35 4e-93 serine hydroxymethyltransferase 3 chloroplastic-like
blastp_kegg lcl|cit:102610283 3 239 + 237 Gaps:50 35.35 529 84.49 5e-93 serine hydroxymethyltransferase 3 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10019689mg 3 239 + 237 Gaps:50 35.35 529 83.96 2e-92 hypothetical protein
blastp_kegg lcl|sly:101263138 3 239 + 237 Gaps:50 35.69 524 82.89 6e-92 serine hydroxymethyltransferase mitochondrial-like
blastp_kegg lcl|pmum:103336461 3 239 + 237 Gaps:50 35.28 530 82.35 6e-92 serine hydroxymethyltransferase 3 chloroplastic-like
blastp_kegg lcl|sot:102605665 3 239 + 237 Gaps:50 35.69 524 82.89 8e-92 serine hydroxymethyltransferase 3 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa004090mg 3 239 + 237 Gaps:50 35.28 530 81.82 2e-91 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa004082mg 3 239 + 237 Gaps:50 35.22 531 81.82 4e-91 hypothetical protein
blastp_kegg lcl|mdm:103444537 3 239 + 237 Gaps:50 35.02 534 81.82 5e-91 serine hydroxymethyltransferase 3 chloroplastic-like
blastp_pdb 1cj0_B 29 219 + 191 Gaps:41 33.62 470 60.13 1e-53 mol:protein length:470 PROTEIN (SERINE HYDROXYMETHYLTRANSFERASE)
blastp_pdb 1cj0_A 29 219 + 191 Gaps:41 33.62 470 60.13 1e-53 mol:protein length:470 PROTEIN (SERINE HYDROXYMETHYLTRANSFERASE)
blastp_pdb 1rv4_B 29 219 + 191 Gaps:41 32.71 483 60.13 1e-53 mol:protein length:483 Serine hydroxymethyltransferase cytosolic
blastp_pdb 1rv4_A 29 219 + 191 Gaps:41 32.71 483 60.13 1e-53 mol:protein length:483 Serine hydroxymethyltransferase cytosolic
blastp_pdb 1rv3_B 29 219 + 191 Gaps:41 32.71 483 60.13 1e-53 mol:protein length:483 Serine hydroxymethyltransferase cytosolic
blastp_pdb 1rv3_A 29 219 + 191 Gaps:41 32.71 483 60.13 1e-53 mol:protein length:483 Serine hydroxymethyltransferase cytosolic
blastp_pdb 1rvy_B 29 219 + 191 Gaps:41 32.71 483 60.13 1e-53 mol:protein length:483 Serine hydroxymethyltransferase cytosolic
blastp_pdb 1rvy_A 29 219 + 191 Gaps:41 32.71 483 60.13 1e-53 mol:protein length:483 Serine hydroxymethyltransferase cytosolic
blastp_pdb 1rvu_B 29 219 + 191 Gaps:41 32.71 483 60.13 1e-53 mol:protein length:483 Serine hydroxymethyltransferase cytosolic
blastp_pdb 1rvu_A 29 219 + 191 Gaps:41 32.71 483 60.13 1e-53 mol:protein length:483 Serine hydroxymethyltransferase cytosolic
blastp_uniprot_sprot sp|Q94JQ3|GLYP3_ARATH 3 239 + 237 Gaps:50 35.35 529 77.54 7e-87 Serine hydroxymethyltransferase 3 chloroplastic OS Arabidopsis thaliana GN SHM3 PE 1 SV 2
blastp_uniprot_sprot sp|P50433|GLYM_SOLTU 24 238 + 215 Gaps:37 34.36 518 53.93 2e-53 Serine hydroxymethyltransferase mitochondrial OS Solanum tuberosum PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZJ5|GLYM1_ARATH 24 238 + 215 Gaps:37 34.43 517 54.49 2e-53 Serine hydroxymethyltransferase 1 mitochondrial OS Arabidopsis thaliana GN SHM1 PE 1 SV 1
blastp_uniprot_sprot sp|P07511|GLYC_RABIT 29 219 + 191 Gaps:41 32.64 484 60.13 5e-53 Serine hydroxymethyltransferase cytosolic OS Oryctolagus cuniculus GN SHMT1 PE 1 SV 2
blastp_uniprot_sprot sp|Q94C74|GLYM2_ARATH 24 238 + 215 Gaps:37 34.43 517 53.93 6e-53 Serine hydroxymethyltransferase 2 mitochondrial OS Arabidopsis thaliana GN SHM2 PE 1 SV 2
blastp_uniprot_sprot sp|P34899|GLYM_PEA 24 231 + 208 Gaps:37 33.01 518 54.97 2e-52 Serine hydroxymethyltransferase mitochondrial OS Pisum sativum PE 1 SV 1
blastp_uniprot_sprot sp|Q7S5N8|GLYM_NEUCR 35 219 + 185 Gaps:43 28.21 546 59.74 3e-52 Putative serine hydroxymethyltransferase mitochondrial OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN cbs-2 PE 3 SV 2
blastp_uniprot_sprot sp|P34896|GLYC_HUMAN 29 219 + 191 Gaps:41 32.71 483 59.49 6e-52 Serine hydroxymethyltransferase cytosolic OS Homo sapiens GN SHMT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5RFK5|GLYC_PONAB 29 219 + 191 Gaps:41 32.71 483 59.49 7e-52 Serine hydroxymethyltransferase cytosolic OS Pongo abelii GN SHMT1 PE 2 SV 1
blastp_uniprot_sprot sp|P35623|GLYC_SHEEP 29 224 + 196 Gaps:41 33.68 484 57.67 9e-52 Serine hydroxymethyltransferase cytosolic OS Ovis aries GN SHMT1 PE 1 SV 3

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 177 231 55 PTHR11680:SF4 none none none
PANTHER 31 139 109 PTHR11680:SF4 none none none
Phobius 1 141 141 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 177 231 55 PTHR11680 "KEGG:00260+2.1.2.1","KEGG:00460+2.1.2.1","KEGG:00630+2.1.2.1","KEGG:00670+2.1.2.1","KEGG:00680+2.1.2.1","MetaCyc:PWY-1622","MetaCyc:PWY-181","MetaCyc:PWY-2161","MetaCyc:PWY-2201","MetaCyc:PWY-3661","MetaCyc:PWY-3661-1","MetaCyc:PWY-3841","MetaCyc:PWY-5497","UniPathway:UPA00193","UniPathway:UPA00288";signature_desc=SERINE HYDROXYMETHYLTRANSFERASE none IPR001085
PANTHER 31 139 109 PTHR11680 "KEGG:00260+2.1.2.1","KEGG:00460+2.1.2.1","KEGG:00630+2.1.2.1","KEGG:00670+2.1.2.1","KEGG:00680+2.1.2.1","MetaCyc:PWY-1622","MetaCyc:PWY-181","MetaCyc:PWY-2161","MetaCyc:PWY-2201","MetaCyc:PWY-3661","MetaCyc:PWY-3661-1","MetaCyc:PWY-3841","MetaCyc:PWY-5497","UniPathway:UPA00193","UniPathway:UPA00288";signature_desc=SERINE HYDROXYMETHYLTRANSFERASE none IPR001085
Gene3D 176 225 50 G3DSA:3.90.1150.10 none none IPR015422
Phobius 163 239 77 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 183 221 39 SSF53383 none none IPR015424
SUPERFAMILY 32 142 111 SSF53383 none none IPR015424
Phobius 142 162 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 33 140 108 PF00464 "KEGG:00260+2.1.2.1","KEGG:00460+2.1.2.1","KEGG:00630+2.1.2.1","KEGG:00670+2.1.2.1","KEGG:00680+2.1.2.1","MetaCyc:PWY-1622","MetaCyc:PWY-181","MetaCyc:PWY-2161","MetaCyc:PWY-2201","MetaCyc:PWY-3661","MetaCyc:PWY-3661-1","MetaCyc:PWY-3841","MetaCyc:PWY-5497","UniPathway:UPA00193","UniPathway:UPA00288" Serine hydroxymethyltransferase IPR001085
Pfam 176 210 35 PF00464 "KEGG:00260+2.1.2.1","KEGG:00460+2.1.2.1","KEGG:00630+2.1.2.1","KEGG:00670+2.1.2.1","KEGG:00680+2.1.2.1","MetaCyc:PWY-1622","MetaCyc:PWY-181","MetaCyc:PWY-2161","MetaCyc:PWY-2201","MetaCyc:PWY-3661","MetaCyc:PWY-3661-1","MetaCyc:PWY-3841","MetaCyc:PWY-5497","UniPathway:UPA00193","UniPathway:UPA00288" Serine hydroxymethyltransferase IPR001085
Gene3D 6 141 136 G3DSA:3.90.1150.10 none none IPR015422

0 Localization

0 Qtllist

0 Targeting