Protein : Qrob_P0409770.2 Q. robur
Protein Identifier  ? Qrob_P0409770.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 3.4.24.34 - Neutrophil collagenase. Code Enzyme  EC:3.4.24.34
Gene Prediction Quality  validated Protein length 

Sequence

Length: 314  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0004222 metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0031012 extracellular matrix A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals and bacteria) or be part of the cell (as in plants).
GO:0008237 metallopeptidase activity Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0852690 1 312 + 312 Gaps:4 99.68 311 68.71 5e-152 Metalloendoproteinase 1 precursor putative (EC:3.4.24.7)
blastp_kegg lcl|cit:102627001 1 312 + 312 Gaps:9 99.69 320 66.77 2e-151 metalloendoproteinase 1-like
blastp_kegg lcl|tcc:TCM_044196 1 312 + 312 Gaps:6 99.68 311 68.39 5e-150 Matrixin family protein
blastp_kegg lcl|tcc:TCM_046068 1 312 + 312 Gaps:6 99.68 311 68.39 5e-150 Matrixin family protein
blastp_kegg lcl|tcc:TCM_044201 1 312 + 312 Gaps:6 99.68 311 67.74 2e-148 Matrixin family protein
blastp_kegg lcl|pmum:103330192 24 312 + 289 Gaps:6 92.04 314 72.32 7e-146 metalloendoproteinase 1-like
blastp_kegg lcl|pmum:103330190 5 312 + 308 Gaps:7 97.44 313 71.15 6e-145 metalloendoproteinase 1-like
blastp_kegg lcl|mdm:103416527 5 312 + 308 Gaps:11 98.06 309 69.97 2e-144 metalloendoproteinase 1-like
blastp_kegg lcl|pmum:103330193 24 312 + 289 Gaps:7 92.01 313 71.18 6e-144 metalloendoproteinase 1-like
blastp_kegg lcl|tcc:TCM_040549 31 312 + 282 Gaps:3 90.65 310 70.82 6e-144 Matrixin family protein putative
blastp_pdb 1su3_B 59 311 + 253 Gaps:40 50.44 450 41.85 3e-38 mol:protein length:450 Interstitial collagenase
blastp_pdb 1su3_A 59 311 + 253 Gaps:40 50.44 450 41.85 3e-38 mol:protein length:450 Interstitial collagenase
blastp_pdb 1slm_A 44 311 + 268 Gaps:44 95.69 255 39.34 2e-33 mol:protein length:255 STROMELYSIN-1
blastp_pdb 1kbc_B 158 311 + 154 Gaps:14 96.34 164 45.57 2e-31 mol:protein length:164 NEUTROPHIL COLLAGENASE
blastp_pdb 1kbc_A 158 311 + 154 Gaps:14 96.34 164 45.57 2e-31 mol:protein length:164 NEUTROPHIL COLLAGENASE
blastp_pdb 1jan_A 158 311 + 154 Gaps:14 96.34 164 45.57 2e-31 mol:protein length:164 MATRIX METALLO PROTEINASE-8 (PHE79 FORM)
blastp_pdb 1bzs_A 158 311 + 154 Gaps:14 95.76 165 45.57 3e-31 mol:protein length:165 NEUTROPHIL COLLAGENASE
blastp_pdb 3dpf_B 158 311 + 154 Gaps:14 96.93 163 45.57 3e-31 mol:protein length:163 Neutrophil collagenase
blastp_pdb 3dpf_A 158 311 + 154 Gaps:14 96.93 163 45.57 3e-31 mol:protein length:163 Neutrophil collagenase
blastp_pdb 3dpe_A 158 311 + 154 Gaps:14 96.93 163 45.57 3e-31 mol:protein length:163 Neutrophil collagenase
blastp_uniprot_sprot sp|P29136|MEP1_SOYBN 48 311 + 264 Gaps:26 83.93 305 47.27 1e-65 Metalloendoproteinase 1 OS Glycine max PE 1 SV 2
blastp_uniprot_sprot sp|P22894|MMP8_HUMAN 52 311 + 260 Gaps:42 50.54 467 41.53 6e-38 Neutrophil collagenase OS Homo sapiens GN MMP8 PE 1 SV 1
blastp_uniprot_sprot sp|P91953|HE_HEMPU 56 311 + 256 Gaps:44 38.24 591 42.04 8e-38 50 kDa hatching enzyme OS Hemicentrotus pulcherrimus PE 1 SV 1
blastp_uniprot_sprot sp|P03956|MMP1_HUMAN 59 311 + 253 Gaps:40 48.40 469 41.85 2e-37 Interstitial collagenase OS Homo sapiens GN MMP1 PE 1 SV 3
blastp_uniprot_sprot sp|P07152|MMP10_RAT 60 311 + 252 Gaps:43 48.11 476 42.36 1e-36 Stromelysin-2 OS Rattus norvegicus GN Mmp10 PE 2 SV 1
blastp_uniprot_sprot sp|O55123|MMP10_MOUSE 60 311 + 252 Gaps:43 48.11 476 41.05 3e-36 Stromelysin-2 OS Mus musculus GN Mmp10 PE 2 SV 1
blastp_uniprot_sprot sp|P21692|MMP1_PIG 88 311 + 224 Gaps:38 43.07 469 44.06 1e-35 Interstitial collagenase OS Sus scrofa GN MMP1 PE 1 SV 2
blastp_uniprot_sprot sp|P57748|MMP20_MOUSE 93 311 + 219 Gaps:38 41.29 482 44.22 2e-35 Matrix metalloproteinase-20 OS Mus musculus GN Mmp20 PE 2 SV 1
blastp_uniprot_sprot sp|P28862|MMP3_MOUSE 55 311 + 257 Gaps:43 49.06 477 41.45 2e-35 Stromelysin-1 OS Mus musculus GN Mmp3 PE 2 SV 2
blastp_uniprot_sprot sp|O70138|MMP8_MOUSE 30 311 + 282 Gaps:51 53.55 465 40.16 8e-35 Neutrophil collagenase OS Mus musculus GN Mmp8 PE 2 SV 2

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 116 129 14 PR00138 none Matrixin signature IPR021190
PRINTS 266 291 26 PR00138 none Matrixin signature IPR021190
PRINTS 299 312 14 PR00138 none Matrixin signature IPR021190
PRINTS 209 237 29 PR00138 none Matrixin signature IPR021190
PRINTS 185 200 16 PR00138 none Matrixin signature IPR021190
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 11 27 17 PTHR10201 none none none
PANTHER 44 311 268 PTHR10201 none none none
SUPERFAMILY 155 312 158 SSF55486 none none none
Gene3D 56 117 62 G3DSA:1.10.101.10 none none IPR002477
Pfam 56 116 61 PF01471 none Putative peptidoglycan binding domain IPR002477
Phobius 20 23 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 47 126 80 SSF47090 none none IPR002477
PIRSF 25 312 288 PIRSF001191 none none IPR016293
Phobius 24 313 290 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 118 312 195 G3DSA:3.40.390.10 none none IPR024079
SMART 158 313 156 SM00235 none Zinc-dependent metalloprotease IPR006026
Phobius 8 19 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 169 311 143 PF00413 none Matrixin IPR001818

4 Localization

Analysis Start End Length
SignalP_EUK 1 25 24
SignalP_GRAM_NEGATIVE 1 25 24
SignalP_GRAM_POSITIVE 1 25 24
TMHMM 5 27 22

0 Qtllist

0 Targeting