Protein : Qrob_P0402260.2 Q. robur
Protein Identifier  ? Qrob_P0402260.2 Organism . Name  Quercus robur
Score  82.0 Score Type  egn
Protein Description  (M=1) K10869 - RAD51-like protein 1 Code Enzyme  EC:3.6.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 392  
Kegg Orthology  K10869
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0006281 DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO:0000724 double-strand break repair via homologous recombination The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.
GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex A DNA recombinase mediator complex that contains the Rad51 paralogs RAD51B, RAD51C, RAD51D, and XRCC2, or orthologs thereof.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103324670 1 326 + 326 Gaps:54 97.04 371 70.00 3e-168 DNA repair protein RAD51 homolog 2
blastp_kegg lcl|pper:PRUPE_ppa015365mg 1 323 + 323 Gaps:54 100.00 357 70.31 1e-167 hypothetical protein
blastp_kegg lcl|fve:101307571 1 326 + 326 Gaps:54 97.30 370 70.83 5e-167 DNA repair protein RAD51 homolog 2-like
blastp_kegg lcl|tcc:TCM_041998 1 324 + 324 Gaps:54 96.50 371 70.39 9e-163 DNA repair (Rad51) family protein isoform 1
blastp_kegg lcl|cam:101498210 1 329 + 329 Gaps:54 98.91 367 68.04 9e-162 DNA repair protein RAD51 homolog 2-like
blastp_kegg lcl|vvi:100250095 1 324 + 324 Gaps:54 81.55 439 69.83 1e-159 DNA repair protein RAD51 homolog 2-like
blastp_kegg lcl|pxb:103945645 1 326 + 326 Gaps:77 97.21 394 65.27 6e-157 DNA repair protein RAD51 homolog 2-like
blastp_kegg lcl|pxb:103943794 1 326 + 326 Gaps:77 97.21 394 65.27 6e-157 DNA repair protein RAD51 homolog 2-like
blastp_kegg lcl|mdm:103447829 1 326 + 326 Gaps:77 97.21 394 65.27 2e-156 DNA repair protein RAD51 homolog 2
blastp_kegg lcl|gmx:100789073 1 327 + 327 Gaps:54 95.50 378 66.76 8e-154 DNA repair protein RAD51 homolog 2-like
blastp_uniprot_sprot sp|Q9SK02|RA51B_ARATH 1 326 + 326 Gaps:54 97.30 370 62.50 2e-147 DNA repair protein RAD51 homolog 2 OS Arabidopsis thaliana GN RAD51B PE 2 SV 2
blastp_uniprot_sprot sp|O15315|RA51B_HUMAN 1 318 + 318 Gaps:62 93.23 384 26.82 1e-29 DNA repair protein RAD51 homolog 2 OS Homo sapiens GN RAD51B PE 1 SV 2
blastp_uniprot_sprot sp|O35719|RA51B_MOUSE 1 304 + 304 Gaps:64 98.29 350 27.91 2e-28 DNA repair protein RAD51 homolog 2 OS Mus musculus GN Rad51b PE 2 SV 2
blastp_uniprot_sprot sp|Q924H5|RA51C_MOUSE 66 301 + 236 Gaps:56 71.04 366 29.23 2e-10 DNA repair protein RAD51 homolog 3 OS Mus musculus GN Rad51c PE 2 SV 1
blastp_uniprot_sprot sp|Q8R2J9|RA51C_CRIGR 66 301 + 236 Gaps:56 71.04 366 28.85 1e-09 DNA repair protein RAD51 homolog 3 OS Cricetulus griseus GN RAD51C PE 2 SV 1
rpsblast_cdd gnl|CDD|29989 84 302 + 219 Gaps:67 99.57 235 29.49 1e-20 cd01123 Rad51_DMC1_radA Rad51_DMC1_radA B. This group of recombinases includes the eukaryotic proteins RAD51 RAD55/57 and the meiosis-specific protein DMC1 and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However this reaction is less efficient and requires accessory proteins such as RAD55/57 ..
rpsblast_cdd gnl|CDD|30003 84 295 + 212 Gaps:74 100.00 226 33.19 6e-17 cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination DNA repair and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein eukaryotes have multiple RecA homologs such as Rad51 DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB..
rpsblast_cdd gnl|CDD|30816 84 312 + 229 Gaps:70 83.51 279 24.46 2e-10 COG0468 RecA RecA/RadA recombinase [DNA replication recombination and repair].
rpsblast_cdd gnl|CDD|181799 83 229 + 147 Gaps:45 73.78 225 29.52 7e-08 PRK09361 radB DNA repair and recombination protein RadB Provisional.
rpsblast_kog gnl|CDD|36646 1 309 + 309 Gaps:81 97.55 326 30.19 2e-32 KOG1433 KOG1433 KOG1433 DNA repair protein RAD51/RHP55 [Replication recombination and repair].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 323 323 PTHR22942:SF15 none none IPR030548
SUPERFAMILY 83 305 223 SSF52540 none none IPR027417
Gene3D 207 302 96 G3DSA:3.40.50.300 none none IPR027417
Gene3D 83 204 122 G3DSA:3.40.50.300 none none IPR027417
PANTHER 1 323 323 PTHR22942 none none none

0 Localization

0 Qtllist

0 Targeting