Protein : Qrob_P0396700.2 Q. robur
Protein Identifier  ? Qrob_P0396700.2 Organism . Name  Quercus robur
Score  91.3 Score Type  egn
Protein Description  (M=50) K01051 - pectinesterase [EC:3.1.1.11] Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 548  
Kegg Orthology  K01051
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103928404 1 547 + 547 Gaps:15 98.77 569 70.46 0.0 probable pectinesterase/pectinesterase inhibitor 7
blastp_kegg lcl|pxb:103928396 1 547 + 547 Gaps:24 100.00 569 70.30 0.0 probable pectinesterase/pectinesterase inhibitor 7
blastp_kegg lcl|mdm:103427444 1 547 + 547 Gaps:15 98.77 569 70.28 0.0 probable pectinesterase/pectinesterase inhibitor 7
blastp_kegg lcl|pper:PRUPE_ppa003639mg 1 547 + 547 Gaps:17 100.00 560 70.00 0.0 hypothetical protein
blastp_kegg lcl|mdm:103449172 1 547 + 547 Gaps:22 100.00 569 69.07 0.0 probable pectinesterase/pectinesterase inhibitor 7
blastp_kegg lcl|pmum:103333986 1 547 + 547 Gaps:17 100.00 560 69.64 0.0 probable pectinesterase/pectinesterase inhibitor 7
blastp_kegg lcl|tcc:TCM_004695 7 547 + 541 Gaps:15 98.58 562 67.87 0.0 Plant invertase/pectin methylesterase inhibitor superfamily
blastp_kegg lcl|cit:102613865 11 547 + 537 Gaps:16 97.70 564 68.60 0.0 probable pectinesterase/pectinesterase inhibitor 7-like
blastp_kegg lcl|rcu:RCOM_1179060 22 547 + 526 Gaps:15 95.23 566 69.02 0.0 Pectinesterase-2 precursor putative (EC:3.1.1.11)
blastp_kegg lcl|gmx:100800971 30 547 + 518 Gaps:16 95.14 555 71.21 0.0 probable pectinesterase/pectinesterase inhibitor 41-like
blastp_pdb 1xg2_A 235 546 + 312 Gaps:4 97.79 317 52.90 9e-106 mol:protein length:317 Pectinesterase 1
blastp_pdb 1gq8_A 226 546 + 321 Gaps:8 100.00 319 51.10 6e-102 mol:protein length:319 PECTINESTERASE
blastp_pdb 1qjv_B 234 536 + 303 Gaps:68 97.37 342 32.13 1e-21 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 234 536 + 303 Gaps:68 97.37 342 32.13 1e-21 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 2ntq_B 234 536 + 303 Gaps:68 97.37 342 32.13 2e-21 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 234 536 + 303 Gaps:68 97.37 342 32.13 2e-21 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 234 536 + 303 Gaps:68 97.37 342 32.13 2e-21 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 234 536 + 303 Gaps:68 97.37 342 32.13 2e-21 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 234 536 + 303 Gaps:68 97.37 342 32.13 2e-21 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 234 536 + 303 Gaps:68 97.37 342 32.13 2e-21 mol:protein length:342 Pectinesterase A
blastp_uniprot_sprot sp|Q8RXK7|PME41_ARATH 7 547 + 541 Gaps:30 99.65 573 59.72 0.0 Probable pectinesterase/pectinesterase inhibitor 41 OS Arabidopsis thaliana GN PME41 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SRX4|PME7_ARATH 8 547 + 540 Gaps:42 99.14 579 57.84 0.0 Probable pectinesterase/pectinesterase inhibitor 7 OS Arabidopsis thaliana GN PME7 PE 2 SV 1
blastp_uniprot_sprot sp|O22256|PME20_ARATH 4 547 + 544 Gaps:28 99.64 560 57.71 0.0 Probable pectinesterase/pectinesterase inhibitor 20 OS Arabidopsis thaliana GN PME20 PE 2 SV 2
blastp_uniprot_sprot sp|Q94CB1|PME25_ARATH 38 547 + 510 Gaps:30 86.27 619 47.94 4e-171 Probable pectinesterase/pectinesterase inhibitor 25 OS Arabidopsis thaliana GN PME25 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FF77|PME47_ARATH 38 547 + 510 Gaps:30 85.58 624 47.00 1e-165 Probable pectinesterase/pectinesterase inhibitor 47 OS Arabidopsis thaliana GN PME47 PE 2 SV 1
blastp_uniprot_sprot sp|O48711|PME12_ARATH 14 546 + 533 Gaps:38 96.34 547 43.26 2e-127 Probable pectinesterase/pectinesterase inhibitor 12 OS Arabidopsis thaliana GN PME12 PE 2 SV 1
blastp_uniprot_sprot sp|O04887|PME2_CITSI 6 546 + 541 Gaps:44 99.41 510 46.15 9e-125 Pectinesterase 2 OS Citrus sinensis GN PECS-2.1 PE 2 SV 1
blastp_uniprot_sprot sp|O22149|PME17_ARATH 38 546 + 509 Gaps:63 93.54 511 47.28 1e-121 Probable pectinesterase/pectinesterase inhibitor 17 OS Arabidopsis thaliana GN PME17 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M9W7|PME22_ARATH 97 546 + 450 Gaps:35 80.85 543 46.01 2e-121 Putative pectinesterase/pectinesterase inhibitor 22 OS Arabidopsis thaliana GN PME22 PE 3 SV 1
blastp_uniprot_sprot sp|P83947|PME1_FICPW 8 546 + 539 Gaps:50 95.96 545 42.26 3e-121 Pectinesterase/pectinesterase inhibitor OS Ficus pumila var. awkeotsang PE 1 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 7 547 541 PTHR31707 none none none
Pfam 36 183 148 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Gene3D 231 543 313 G3DSA:2.160.20.10 none none IPR012334
Phobius 7 18 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 232 544 313 SSF51126 none none IPR011050
TIGRFAM 9 186 178 TIGR01614 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" PME_inhib: pectinesterase inhibitor domain IPR006501
Pfam 234 531 298 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
ProSitePatterns 380 389 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
SUPERFAMILY 36 186 151 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
PANTHER 7 547 541 PTHR31707:SF7 none none none
Gene3D 36 186 151 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Phobius 25 547 523 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SMART 29 183 155 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Phobius 19 24 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_EUK 1 24 23
SignalP_GRAM_POSITIVE 1 24 23
SignalP_GRAM_NEGATIVE 1 24 23

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran2_2002_QTL12_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 4,33 33,33 lod 6,5 9,1

0 Targeting