Protein : Qrob_P0384200.2 Q. robur
Protein Identifier  ? Qrob_P0384200.2 Organism . Name  Quercus robur
Score  28.0 Score Type  egn
Protein Description  (M=3) PTHR11581 - 30S/40S RIBOSOMAL PROTEIN S4 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 334  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0008017 microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
GO:0007010 cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100814485 89 329 + 241 Gaps:39 46.68 587 54.38 6e-82 microtubule-associated protein 70-2-like
blastp_kegg lcl|pxb:103940444 89 329 + 241 Gaps:38 44.83 609 52.75 3e-80 microtubule-associated protein 70-2-like
blastp_kegg lcl|pxb:103940438 89 329 + 241 Gaps:38 44.83 609 52.75 3e-80 microtubule-associated protein 70-2-like
blastp_kegg lcl|pmum:103339187 89 329 + 241 Gaps:41 44.59 610 53.31 3e-79 microtubule-associated protein 70-2-like
blastp_kegg lcl|pper:PRUPE_ppa003030mg 89 329 + 241 Gaps:41 44.59 610 52.94 2e-77 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_001G123200g 89 329 + 241 Gaps:39 46.76 586 53.28 4e-76 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s03740g 89 329 + 241 Gaps:40 43.57 622 53.14 1e-75 POPTRDRAFT_865412 hypothetical protein
blastp_kegg lcl|vvi:100257276 89 329 + 241 Gaps:43 45.44 603 53.28 2e-75 microtubule-associated protein 70-2-like
blastp_kegg lcl|gmx:100799164 89 329 + 241 Gaps:39 46.68 587 53.28 2e-75 microtubule-associated protein 70-2-like
blastp_kegg lcl|pop:POPTR_0016s03570g 89 329 + 241 Gaps:45 44.37 604 55.22 3e-75 POPTRDRAFT_1102922 hypothetical protein
blastp_pdb 3iz6_D 29 83 + 55 none 20.75 265 80.00 2e-24 mol:protein length:265 40S ribosomal protein S4 (S4e)
blastp_pdb 2xzn_W 22 84 + 63 none 24.23 260 41.27 8e-14 mol:protein length:260 40S RIBOSOMAL PROTEIN S4
blastp_pdb 2xzm_W 22 84 + 63 none 24.23 260 41.27 8e-14 mol:protein length:260 40S RIBOSOMAL PROTEIN S4
blastp_pdb 3u5g_E 23 87 + 65 none 24.90 261 50.77 2e-13 mol:protein length:261 40S ribosomal protein S4-A
blastp_pdb 3u5c_E 23 87 + 65 none 24.90 261 50.77 2e-13 mol:protein length:261 40S ribosomal protein S4-A
blastp_pdb 3izb_D 23 87 + 65 none 24.90 261 50.77 2e-13 mol:protein length:261 40S ribosomal protein rpS4 (S4e)
blastp_uniprot_sprot sp|Q8L7S4|MP702_ARATH 89 288 + 200 Gaps:39 36.75 634 46.78 6e-51 Microtubule-associated protein 70-2 OS Arabidopsis thaliana GN MAP70.2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C9X0|MP701_ARATH 89 329 + 241 Gaps:46 43.57 622 45.76 2e-50 Microtubule-associated protein 70-1 OS Arabidopsis thaliana GN MAP70.1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZUA3|MP703_ARATH 89 283 + 195 Gaps:40 36.09 629 46.70 3e-50 Microtubule-associated protein 70-3 OS Arabidopsis thaliana GN MAP70.3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LQU7|MP704_ARATH 89 295 + 207 Gaps:41 39.40 604 46.22 2e-49 Microtubule-associated protein 70-4 OS Arabidopsis thaliana GN MAP70.4 PE 1 SV 1
blastp_uniprot_sprot sp|Q6Z746|MP702_ORYSJ 89 283 + 195 Gaps:38 37.90 599 45.81 4e-49 Microtubule-associated protein 70-2 OS Oryza sativa subsp. japonica GN MAP70.2 PE 2 SV 1
blastp_uniprot_sprot sp|Q653N3|MP703_ORYSJ 89 282 + 194 Gaps:39 37.34 608 46.26 8e-45 Microtubule-associated protein 70-3 OS Oryza sativa subsp. japonica GN MAP70.3 PE 2 SV 1
blastp_uniprot_sprot sp|Q2QLI6|MP701_ORYSJ 89 298 + 210 Gaps:51 40.39 567 43.67 7e-39 Microtubule-associated protein 70-1 OS Oryza sativa subsp. japonica GN MAP70.1 PE 2 SV 1
blastp_uniprot_sprot sp|Q93VH9|RS41_ARATH 29 87 + 59 none 22.61 261 89.83 3e-29 40S ribosomal protein S4-1 OS Arabidopsis thaliana GN RPS4A PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYK6|RS43_ARATH 29 90 + 62 none 23.66 262 83.87 7e-29 40S ribosomal protein S4-3 OS Arabidopsis thaliana GN RPS4D PE 2 SV 2
blastp_uniprot_sprot sp|P49204|RS42_ARATH 29 90 + 62 none 23.66 262 83.87 7e-29 40S ribosomal protein S4-2 OS Arabidopsis thaliana GN RPS4B PE 2 SV 4
rpsblast_cdd gnl|CDD|203570 92 329 + 238 Gaps:43 76.07 351 44.19 2e-43 pfam07058 Myosin_HC-like Myosin II heavy chain-like. This family represents a conserved region within a number of myosin II heavy chain-like proteins that seem to be specific to Arabidopsis thaliana.
rpsblast_cdd gnl|CDD|177670 22 87 + 66 none 25.29 261 72.73 5e-25 PLN00036 PLN00036 40S ribosomal protein S4 Provisional.
rpsblast_cdd gnl|CDD|185457 22 84 + 63 none 24.05 262 52.38 7e-15 PTZ00118 PTZ00118 40S ribosomal protein S4 Provisional.
rpsblast_cdd gnl|CDD|140250 29 86 + 58 Gaps:1 21.61 273 42.37 7e-09 PTZ00223 PTZ00223 40S ribosomal protein S4 Provisional.

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 89 116 28 PF07058 none Myosin II heavy chain-like IPR009768
Pfam 114 313 200 PF07058 none Myosin II heavy chain-like IPR009768
Coils 177 198 22 Coil none none none
PANTHER 29 92 64 PTHR11581 none none IPR000876

0 Localization

0 Qtllist

0 Targeting