Protein : Qrob_P0377990.2 Q. robur
Protein Identifier  ? Qrob_P0377990.2 Organism . Name  Quercus robur
Score  67.4 Score Type  egn
Protein Description  (M=23) K14709 - solute carrier family 39 (zinc transporter), member 1/2/3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 354  
Kegg Orthology  K14709
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0030001 metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0046873 metal ion transmembrane transporter activity Enables the transfer of metal ions from one side of a membrane to the other.
GO:0005385 zinc ion transmembrane transporter activity Enables the transfer of zinc (Zn) ions from one side of a membrane to the other.
GO:0071577 zinc II ion transmembrane transport A process in which a zinc II ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102627766 1 353 + 353 Gaps:8 100.00 355 69.58 5e-174 zinc transporter 8-like
blastp_kegg lcl|sot:102600170 1 353 + 353 Gaps:14 100.00 343 70.55 2e-172 zinc transporter 5-like
blastp_kegg lcl|pvu:PHAVU_006G001000g 5 353 + 349 Gaps:4 98.59 354 67.34 6e-168 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1247260 19 353 + 335 Gaps:7 95.77 355 68.53 2e-165 zinc/iron transporter putative (EC:1.3.1.74)
blastp_kegg lcl|pmum:103328995 22 353 + 332 Gaps:8 93.82 356 71.56 2e-164 zinc transporter 8-like
blastp_kegg lcl|pmum:103328994 22 353 + 332 Gaps:8 93.82 356 71.56 1e-162 zinc transporter 8-like
blastp_kegg lcl|pop:POPTR_0006s00860g 1 353 + 353 Gaps:3 100.00 354 66.95 2e-161 POPTRDRAFT_418240 zinc transporter protein ZIP1
blastp_kegg lcl|cic:CICLE_v10011940mg 5 353 + 349 Gaps:8 90.46 388 69.23 6e-161 hypothetical protein
blastp_kegg lcl|sly:101248893 14 353 + 340 Gaps:10 97.66 342 70.36 8e-161 zinc transporter 5-like
blastp_kegg lcl|tcc:TCM_002136 3 353 + 351 none 98.87 355 69.23 1e-160 Zinc transporter 5 precursor
blastp_uniprot_sprot sp|Q6L8G0|ZIP5_ORYSJ 2 353 + 352 Gaps:8 99.15 353 52.57 9e-131 Zinc transporter 5 OS Oryza sativa subsp. japonica GN ZIP5 PE 2 SV 1
blastp_uniprot_sprot sp|O23039|ZIP5_ARATH 25 353 + 329 Gaps:12 91.94 360 57.40 6e-128 Zinc transporter 5 OS Arabidopsis thaliana GN ZIP5 PE 2 SV 1
blastp_uniprot_sprot sp|A3BI11|ZIP8_ORYSJ 44 353 + 310 Gaps:31 87.44 390 58.94 6e-123 Zinc transporter 8 OS Oryza sativa subsp. japonica GN ZIP8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SLG3|ZIP3_ARATH 25 353 + 329 Gaps:24 89.97 339 60.98 5e-121 Zinc transporter 3 OS Arabidopsis thaliana GN ZIP3 PE 2 SV 1
blastp_uniprot_sprot sp|O81123|ZIP1_ARATH 4 353 + 350 Gaps:17 96.62 355 51.31 2e-118 Zinc transporter 1 OS Arabidopsis thaliana GN ZIP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W245|ZIP10_ARATH 25 353 + 329 Gaps:5 91.21 364 50.90 1e-115 Probable zinc transporter 10 OS Arabidopsis thaliana GN ZIP10 PE 1 SV 2
blastp_uniprot_sprot sp|Q7XLD4|ZIP3_ORYSJ 1 353 + 353 Gaps:19 100.00 364 50.00 1e-114 Zinc transporter 3 OS Oryza sativa subsp. japonica GN ZIP3 PE 1 SV 2
blastp_uniprot_sprot sp|Q6L8G1|IRT2_ORYSJ 33 353 + 321 Gaps:18 88.38 370 50.76 1e-110 Fe(2+) transport protein 2 OS Oryza sativa subsp. japonica GN IRT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8S3W4|ZIP8_ARATH 1 353 + 353 Gaps:20 100.00 347 50.43 4e-109 Probable zinc transporter 8 OS Arabidopsis thaliana GN ZIP8 PE 2 SV 1
blastp_uniprot_sprot sp|Q75HB1|IRT1_ORYSJ 31 353 + 323 Gaps:31 87.17 374 50.61 2e-108 Fe(2+) transport protein 1 OS Oryza sativa subsp. japonica GN IRT1 PE 2 SV 1
rpsblast_cdd gnl|CDD|162055 26 353 + 328 Gaps:8 100.00 324 60.80 1e-121 TIGR00820 zip ZIP zinc/iron transport family. The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals plants and yeast. Theycomprise a diverse family with several paralogues in any one organism (e.g. at least five in Caenorabditis elegans at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins Zrt1 and Zrt2 both probably transport Zn2+ with high specificity but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+ and at least one transports a range of metal ions. The energy source fortransport has not been characterized but these systems probably function as secondary carriers.
rpsblast_cdd gnl|CDD|177818 25 353 + 329 Gaps:23 91.99 337 52.26 7e-88 PLN02159 PLN02159 Fe(2+) transport protein.
rpsblast_cdd gnl|CDD|202272 41 350 + 310 Gaps:12 100.00 314 34.39 2e-62 pfam02535 Zip ZIP Zinc transporter. The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product although this protein in not found within this family.
rpsblast_kog gnl|CDD|36771 27 353 + 327 Gaps:3 99.69 327 46.32 5e-86 KOG1558 KOG1558 KOG1558 Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism].

25 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 260 281 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 313 332 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 144 198 55 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 231 253 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 293 312 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 24 353 330 PTHR11040:SF35 none none none
Phobius 199 219 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 118 143 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 254 259 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 66 76 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 282 292 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 25 42 18 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 19 24 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 42 350 309 PF02535 none ZIP Zinc transporter IPR003689
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 24 353 330 PTHR11040 none none none
TIGRFAM 26 353 328 TIGR00820 none zip: ZIP zinc/iron transport family IPR004698
Phobius 353 353 1 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 43 65 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 220 230 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 333 352 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 99 117 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 7 18 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 77 98 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

10 Localization

Analysis Start End Length
TMHMM 45 64 19
TMHMM 7 25 18
SignalP_GRAM_NEGATIVE 1 24 23
TMHMM 259 281 22
TMHMM 333 350 17
TMHMM 119 141 22
TMHMM 77 99 22
SignalP_EUK 1 24 23
SignalP_GRAM_POSITIVE 1 24 23
TMHMM 291 313 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5

0 Targeting