Protein : Qrob_P0377930.2 Q. robur
Protein Identifier  ? Qrob_P0377930.2 Organism . Name  Quercus robur
Score  76.2 Score Type  egn
Protein Description  (M=1) K02693 - photosystem I subunit IV Gene Prediction Quality  validated
Protein length 

Sequence

Length: 88  
Kegg Orthology  K02693
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0009522 photosystem I A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
GO:0009538 photosystem I reaction center A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10022750mg 31 87 + 57 none 39.86 143 96.49 2e-32 hypothetical protein
blastp_kegg lcl|cit:102577948 31 87 + 57 none 39.86 143 96.49 2e-32 PSAE psaE1 psaE2 PSI reaction center subunit III
blastp_kegg lcl|rcu:RCOM_1723530 31 87 + 57 none 40.43 141 96.49 4e-32 photosystem I reaction center subunit IV A chloroplast precursor
blastp_kegg lcl|cam:101510350 31 87 + 57 none 40.71 140 92.98 3e-31 photosystem I reaction center subunit IV A chloroplastic-like
blastp_kegg lcl|pop:POPTR_0002s25510g 31 87 + 57 none 40.71 140 89.47 2e-30 POPTRDRAFT_711610 Photosystem I reaction center subunit IV A family protein
blastp_kegg lcl|mtr:MTR_7g099390 31 87 + 57 none 41.30 138 91.23 2e-30 Photosystem I reaction center subunit IV A
blastp_kegg lcl|vvi:100256684 31 86 + 56 none 39.16 143 94.64 2e-30 photosystem I reaction center subunit IV A chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa012923mg 31 87 + 57 none 38.26 149 92.98 3e-30 hypothetical protein
blastp_kegg lcl|fve:101312685 31 87 + 57 none 40.43 141 92.98 4e-30 photosystem I reaction center subunit IV A chloroplastic-like
blastp_kegg lcl|pmum:103334364 31 87 + 57 none 38.78 147 92.98 4e-30 photosystem I reaction center subunit IV B chloroplastic
blastp_pdb 3lw5_E 31 87 + 57 none 89.06 64 87.72 2e-29 mol:protein length:64 Putative uncharacterized protein
blastp_pdb 2o01_E 31 86 + 56 none 90.32 62 85.71 2e-29 mol:protein length:62 Photosystem I reaction center subunit IV A c
blastp_pdb 2wsf_E 31 86 + 56 none 39.16 143 85.71 3e-29 mol:protein length:143 PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A C
blastp_pdb 2wse_E 31 86 + 56 none 39.16 143 85.71 3e-29 mol:protein length:143 PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A C
blastp_pdb 2wsc_E 31 86 + 56 none 39.16 143 85.71 3e-29 mol:protein length:143 PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A C
blastp_pdb 3pcq_E 31 86 + 56 Gaps:7 84.00 75 57.14 3e-18 mol:protein length:75 Photosystem I reaction center subunit IV
blastp_pdb 1jb0_E 31 86 + 56 Gaps:7 84.00 75 57.14 3e-18 mol:protein length:75 PHOTOSYSTEM 1 REACTION CENTRE SUBUNIT IV
blastp_pdb 1qp3_A 31 87 + 57 Gaps:1 80.00 70 55.36 3e-15 mol:protein length:70 PROTEIN (PSAE PROTEIN)
blastp_pdb 1qp2_A 31 87 + 57 Gaps:1 80.00 70 55.36 3e-15 mol:protein length:70 PROTEIN (PSAE PROTEIN)
blastp_pdb 1psf_A 31 86 + 56 Gaps:8 89.86 69 50.00 2e-12 mol:protein length:69 PHOTOSYSTEM I ACCESSORY PROTEIN E
blastp_uniprot_sprot sp|P12354|PSAE_SPIOL 31 86 + 56 none 44.80 125 87.50 3e-30 Photosystem I reaction center subunit IV chloroplastic OS Spinacia oleracea GN PSAE-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q41229|PSAEB_NICSY 31 87 + 57 none 39.86 143 85.96 5e-30 Photosystem I reaction center subunit IV B chloroplastic OS Nicotiana sylvestris GN PSAEB PE 1 SV 1
blastp_uniprot_sprot sp|Q9S714|PSAE2_ARATH 31 87 + 57 none 39.31 145 85.96 1e-29 Photosystem I reaction center subunit IV B chloroplastic OS Arabidopsis thaliana GN PSAE2 PE 2 SV 1
blastp_uniprot_sprot sp|Q41228|PSAEA_NICSY 31 87 + 57 none 40.43 141 87.72 1e-29 Photosystem I reaction center subunit IV A chloroplastic OS Nicotiana sylvestris GN PSAEA PE 1 SV 1
blastp_uniprot_sprot sp|P13194|PSAE_HORVU 31 86 + 56 none 38.10 147 87.50 6e-29 Photosystem I reaction center subunit IV chloroplastic OS Hordeum vulgare GN PSAE PE 1 SV 2
blastp_uniprot_sprot sp|Q9S831|PSAE1_ARATH 31 86 + 56 none 39.16 143 85.71 1e-28 Photosystem I reaction center subunit IV A chloroplastic OS Arabidopsis thaliana GN PSAE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7NFW6|PSAE_GLOVI 31 87 + 57 none 87.69 65 56.14 9e-18 Photosystem I reaction center subunit IV OS Gloeobacter violaceus (strain PCC 7421) GN psaE PE 1 SV 1
blastp_uniprot_sprot sp|P0A423|PSAE_THEEB 31 86 + 56 Gaps:7 82.89 76 57.14 9e-18 Photosystem I reaction center subunit IV OS Thermosynechococcus elongatus (strain BP-1) GN psaE PE 1 SV 2
blastp_uniprot_sprot sp|P0A424|PSAE_SYNEL 31 86 + 56 Gaps:7 82.89 76 57.14 9e-18 Photosystem I reaction center subunit IV OS Synechococcus elongatus GN psaE PE 1 SV 2
blastp_uniprot_sprot sp|P12352|PSAE_CHLRE 32 83 + 52 Gaps:1 52.58 97 70.59 1e-16 Photosystem I reaction center subunit IV chloroplastic OS Chlamydomonas reinhardtii GN PSAE PE 1 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 17 17 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 31 87 57 PF02427 none Photosystem I reaction centre subunit IV / PsaE IPR003375
Phobius 12 17 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
ProDom 33 86 54 PD004772 none I PHOTOSYSTEM SUBUNIT IV REACTION CENTER MEMBRANE PHOTOSYNTHESIS THYLAKOID CHLOROPLAST IPR003375
Phobius 3 11 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 31 87 57 G3DSA:2.30.30.50 none none none
Phobius 18 87 70 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 31 86 56 SSF50090 none none IPR008990

1 Localization

Analysis Start End Length
SignalP_EUK 1 17 16

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5

0 Targeting