Protein : Qrob_P0371890.2 Q. robur
Protein Identifier  ? Qrob_P0371890.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=5) 1.14.12.20 - Pheophorbide a oxygenase. Code Enzyme  EC:1.14.12.20
Gene Prediction Quality  validated Protein length 

Sequence

Length: 444  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051537 2 iron, 2 sulfur cluster binding Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0001s04310g 1 443 + 443 Gaps:41 100.00 478 64.64 0.0 POPTRDRAFT_639645 Rieske (2Fe-2S) domain-containing family protein
blastp_kegg lcl|pop:POPTR_0003s21190g 1 442 + 442 Gaps:83 99.81 520 54.53 0.0 POPTRDRAFT_647468 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0445950 1 442 + 442 Gaps:80 99.80 509 54.33 0.0 pheophorbide A oxygenase putative
blastp_kegg lcl|tcc:TCM_040033 1 443 + 443 Gaps:110 100.00 535 53.83 0.0 ACD1-like
blastp_kegg lcl|rcu:RCOM_0445980 1 443 + 443 Gaps:115 100.00 552 52.54 0.0 pheophorbide A oxygenase putative
blastp_kegg lcl|pmum:103324200 1 443 + 443 Gaps:101 100.00 536 53.73 3e-180 protochlorophyllide-dependent translocon component 52 chloroplastic
blastp_kegg lcl|pxb:103954046 1 443 + 443 Gaps:102 100.00 537 52.14 2e-179 protochlorophyllide-dependent translocon component 52 chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_002G236700g 1 443 + 443 Gaps:99 100.00 528 53.60 2e-177 hypothetical protein
blastp_kegg lcl|pxb:103954047 1 443 + 443 Gaps:101 100.00 536 51.31 5e-176 protochlorophyllide-dependent translocon component 52 chloroplastic-like
blastp_kegg lcl|gmx:100800521 1 443 + 443 Gaps:100 100.00 531 52.92 4e-174 protochlorophyllide-dependent translocon component 52 chloroplastic-like
blastp_pdb 3gts_C 128 231 + 104 Gaps:16 26.93 349 40.43 3e-10 mol:protein length:349 DdmC
blastp_pdb 3gts_B 128 231 + 104 Gaps:16 26.93 349 40.43 3e-10 mol:protein length:349 DdmC
blastp_pdb 3gts_A 128 231 + 104 Gaps:16 26.93 349 40.43 3e-10 mol:protein length:349 DdmC
blastp_pdb 3gte_C 128 231 + 104 Gaps:16 26.93 349 40.43 3e-10 mol:protein length:349 DdmC
blastp_pdb 3gte_B 128 231 + 104 Gaps:16 26.93 349 40.43 3e-10 mol:protein length:349 DdmC
blastp_pdb 3gte_A 128 231 + 104 Gaps:16 26.93 349 40.43 3e-10 mol:protein length:349 DdmC
blastp_pdb 3gob_C 128 231 + 104 Gaps:16 26.93 349 40.43 3e-10 mol:protein length:349 DdmC
blastp_pdb 3gob_B 128 231 + 104 Gaps:16 26.93 349 40.43 3e-10 mol:protein length:349 DdmC
blastp_pdb 3gob_A 128 231 + 104 Gaps:16 26.93 349 40.43 3e-10 mol:protein length:349 DdmC
blastp_pdb 3gl2_C 128 231 + 104 Gaps:16 26.93 349 40.43 3e-10 mol:protein length:349 DdmC
blastp_uniprot_sprot sp|Q8W496|PTC52_ARATH 4 441 + 438 Gaps:11 67.62 559 62.70 3e-97 Protochlorophyllide-dependent translocon component 52 chloroplastic OS Arabidopsis thaliana GN PTC52 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FYC2|PAO_ARATH 17 441 + 425 Gaps:30 67.23 537 35.73 7e-39 Pheophorbide a oxygenase chloroplastic OS Arabidopsis thaliana GN PAO PE 1 SV 1
blastp_uniprot_sprot sp|Q9SK50|TIC55_ARATH 34 384 + 351 Gaps:122 85.53 539 25.16 2e-23 Protein TIC 55 chloroplastic OS Arabidopsis thaliana GN TIC55 PE 2 SV 1
blastp_uniprot_sprot sp|O49931|TIC55_PEA 71 237 + 167 Gaps:25 29.29 553 35.19 2e-21 Protein TIC 55 chloroplastic OS Pisum sativum GN TIC55 PE 1 SV 1
blastp_uniprot_sprot sp|H9N291|NDMD_PSEPU 86 197 + 112 Gaps:7 18.20 588 33.64 5e-11 Oxidoreductase NdmD OS Pseudomonas putida GN ndmD PE 4 SV 1
blastp_uniprot_sprot sp|Q9AHG3|TSAM2_COMTE 88 199 + 112 Gaps:11 29.77 346 37.86 8e-09 Putative toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM2 OS Comamonas testosteroni GN tsaM2 PE 5 SV 1
blastp_uniprot_sprot sp|Q44256|CBAA_COMTE 88 199 + 112 Gaps:4 25.00 432 30.56 1e-08 3-chlorobenzoate-3 4-dioxygenase oxygenase subunit OS Comamonas testosteroni GN cbaA PE 3 SV 1
blastp_uniprot_sprot sp|Q9MBA1|CAO_ARATH 88 225 + 138 Gaps:39 22.20 536 33.61 6e-08 Chlorophyllide a oxygenase chloroplastic OS Arabidopsis thaliana GN CAO PE 1 SV 1
blastp_uniprot_sprot sp|H9N289|NDMA_PSEPU 88 224 + 137 Gaps:18 36.75 351 33.33 9e-08 Methylxanthine N1-demethylase NdmA OS Pseudomonas putida GN ndmA PE 1 SV 1
blastp_uniprot_sprot sp|Q8S7E1|CAO_ORYSJ 88 204 + 117 Gaps:30 19.78 541 35.51 1e-07 Chlorophyllide a oxygenase chloroplastic OS Oryza sativa subsp. japonica GN CAO PE 2 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 80 201 122 SSF50022 none none IPR017941
Phobius 1 400 400 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 401 421 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 57 363 307 PTHR21266:SF25 none none none
Phobius 422 443 22 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 87 175 89 PF00355 none Rieske [2Fe-2S] domain IPR017941
Gene3D 87 204 118 G3DSA:2.102.10.10 none none IPR017941
PANTHER 57 363 307 PTHR21266 none none none
ProSiteProfiles 88 198 111 PS51296 none Rieske [2Fe-2S] iron-sulfur domain profile. IPR017941

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting