Protein : Qrob_P0371760.2 Q. robur
Protein Identifier  ? Qrob_P0371760.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR11785//PTHR11785:SF286 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED (PTHR11785:SF286) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 143  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0003333 amino acid transmembrane transport The directed movement of amino acids, organic acids containing one or more amino substituents across a membrane by means of some agent such as a transporter or pore.
GO:0015171 amino acid transmembrane transporter activity Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.
GO:0006865 amino acid transport The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101312062 8 134 + 127 Gaps:1 100.00 128 76.56 3e-65 amino-acid permease BAT1-like
blastp_kegg lcl|vvi:100266454 6 138 + 133 Gaps:2 24.90 526 77.10 7e-64 uncharacterized LOC100266454
blastp_kegg lcl|rcu:RCOM_0577340 10 135 + 126 Gaps:1 78.88 161 75.59 6e-62 hypothetical protein
blastp_kegg lcl|pmum:103341663 8 142 + 135 Gaps:5 36.61 702 68.09 5e-60 amino-acid permease BAT1
blastp_kegg lcl|pop:POPTR_0008s12390g 17 133 + 117 Gaps:2 88.81 134 77.31 4e-59 POPTRDRAFT_420797 hypothetical protein
blastp_kegg lcl|pda:103705651 7 138 + 132 Gaps:3 25.14 529 70.68 3e-56 amino-acid permease BAT1 homolog
blastp_kegg lcl|tcc:TCM_009394 7 138 + 132 none 37.33 651 67.49 4e-56 Bidirectional amino acid transporter 1
blastp_kegg lcl|pper:PRUPE_ppa004208mg 8 138 + 131 Gaps:4 25.10 522 74.05 2e-53 hypothetical protein
blastp_kegg lcl|sot:102592875 5 138 + 134 Gaps:3 25.66 534 62.04 3e-51 amino-acid permease BAT1 homolog
blastp_kegg lcl|sbi:SORBI_03g027360 10 134 + 125 Gaps:17 99.30 143 61.27 5e-51 SORBIDRAFT_03g027360 Sb03g027360 hypothetical protein
blastp_uniprot_sprot sp|B9EXZ6|BAT1_ORYSJ 30 138 + 109 none 20.96 520 64.22 8e-46 Amino-acid permease BAT1 homolog OS Oryza sativa subsp. japonica GN BAT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZU50|BAT1_ARATH 12 138 + 127 Gaps:5 23.64 516 61.48 1e-44 Amino-acid permease BAT1 OS Arabidopsis thaliana GN BAT1 PE 2 SV 2
blastp_uniprot_sprot sp|Q09887|YC9D_SCHPO 22 138 + 117 Gaps:4 21.51 544 47.01 3e-24 Uncharacterized amino-acid permease C584.13 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPCC584.13 PE 3 SV 1
blastp_uniprot_sprot sp|O74537|YCQ4_SCHPO 2 134 + 133 Gaps:3 23.70 557 40.15 8e-23 Uncharacterized amino-acid permease C74.04 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPCC74.04 PE 3 SV 1
blastp_uniprot_sprot sp|Q9US40|YFZ1_SCHPO 32 134 + 103 none 18.17 567 45.63 9e-21 Uncharacterized amino-acid permease C1039.01 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC1039.01 PE 3 SV 1
blastp_uniprot_sprot sp|O60113|YG64_SCHPO 18 138 + 121 none 22.32 542 36.36 1e-16 Uncharacterized amino-acid permease C15C4.04c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC15C4.04c PE 3 SV 1
blastp_uniprot_sprot sp|Q9UT18|THI9_SCHPO 3 136 + 134 Gaps:5 21.83 591 27.91 1e-14 Thiamine transporter thi9 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN thi9 PE 1 SV 1
blastp_uniprot_sprot sp|O59813|YCT3_SCHPO 26 135 + 110 none 19.86 554 33.64 6e-14 Uncharacterized amino-acid permease C794.03 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPCC794.03 PE 2 SV 1
blastp_uniprot_sprot sp|P32837|UGA4_YEAST 22 133 + 112 Gaps:1 19.44 571 37.84 1e-13 GABA-specific permease OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN UGA4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C0Z0|YKM2_SCHPO 1 134 + 134 Gaps:18 24.68 543 34.33 4e-12 Uncharacterized amino-acid permease PB24D3.02c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAPB24D3.02c PE 3 SV 1
rpsblast_cdd gnl|CDD|162100 33 138 + 106 none 21.99 482 49.06 6e-30 TIGR00907 2A0304 amino acid permease (GABA permease).
rpsblast_cdd gnl|CDD|132469 33 130 + 98 Gaps:1 20.42 475 37.11 4e-13 TIGR03428 ureacarb_perm permease urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase but other uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
rpsblast_cdd gnl|CDD|205698 52 141 + 90 Gaps:1 20.94 425 25.84 4e-10 pfam13520 AA_permease_2 Amino acid permease.
rpsblast_kog gnl|CDD|36503 28 138 + 111 none 20.18 550 50.45 5e-33 KOG1289 KOG1289 KOG1289 Amino acid transporters [Amino acid transport and metabolism].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 64 82 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 138 138 PTHR11785:SF286 none none none
Phobius 1 41 41 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 83 106 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 42 63 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 52 140 89 PF13520 none Amino acid permease IPR002293
Phobius 107 142 36 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSitePatterns 76 107 32 PS00218 none Amino acid permeases signature. IPR004840
PANTHER 1 138 138 PTHR11785 none none IPR002293

2 Localization

Analysis Start End Length
TMHMM 45 67 22
TMHMM 82 104 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting