Protein : Qrob_P0371610.2 Q. robur
Protein Identifier  ? Qrob_P0371610.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 1.14.11.4 - Procollagen-lysine 5-dioxygenase. Code Enzyme  EC:1.14.11.4
Gene Prediction Quality  validated Protein length 

Sequence

Length: 363  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0005506 iron ion binding Interacting selectively and non-covalently with iron (Fe) ions.
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.
GO:0031418 L-ascorbic acid binding Interacting selectively and non-covalently with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101228566 1 350 + 350 Gaps:15 87.76 384 79.23 0.0 uncharacterized LOC101228566
blastp_kegg lcl|csv:101218320 1 350 + 350 Gaps:15 87.76 384 79.23 0.0 uncharacterized LOC101218320
blastp_kegg lcl|cmo:103504586 1 350 + 350 Gaps:15 87.76 384 78.93 0.0 uncharacterized PKHD-type hydroxylase At1g22950-like
blastp_kegg lcl|pxb:103948131 1 350 + 350 Gaps:18 87.89 380 76.95 0.0 uncharacterized PKHD-type hydroxylase At1g22950-like
blastp_kegg lcl|pmum:103341542 1 350 + 350 Gaps:20 87.79 385 76.63 0.0 uncharacterized PKHD-type hydroxylase At1g22950-like
blastp_kegg lcl|mdm:103402646 2 350 + 349 Gaps:18 87.63 380 75.38 0.0 uncharacterized PKHD-type hydroxylase At1g22950-like
blastp_kegg lcl|pper:PRUPE_ppa007198mg 1 350 + 350 Gaps:20 89.42 378 76.33 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_026929 8 350 + 343 Gaps:12 86.72 384 76.28 3e-180 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 1
blastp_kegg lcl|pxb:103947076 2 350 + 349 Gaps:18 87.40 381 75.68 2e-179 uncharacterized PKHD-type hydroxylase At1g22950-like
blastp_kegg lcl|cit:102616837 1 350 + 350 Gaps:20 87.60 379 74.10 7e-178 uncharacterized LOC102616837
blastp_uniprot_sprot sp|Q3ED68|Y1295_ARATH 42 350 + 309 Gaps:3 77.58 397 63.96 4e-146 Uncharacterized PKHD-type hydroxylase At1g22950 OS Arabidopsis thaliana GN At1g22950 PE 2 SV 2
blastp_uniprot_sprot sp|Q28C22|OGFD2_XENTR 120 346 + 227 Gaps:22 64.47 349 41.33 1e-46 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS Xenopus tropicalis GN ogfod2 PE 2 SV 1
blastp_uniprot_sprot sp|A3KGZ2|OGFD2_DANRE 98 346 + 249 Gaps:18 72.17 345 36.14 2e-43 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS Danio rerio GN ogfod2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CQ04|OGFD2_MOUSE 108 346 + 239 Gaps:19 68.77 349 35.42 2e-39 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS Mus musculus GN Ogfod2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6N063|OGFD2_HUMAN 110 346 + 237 Gaps:21 68.00 350 37.39 1e-38 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS Homo sapiens GN OGFOD2 PE 2 SV 2
blastp_uniprot_sprot sp|Q20679|PLOD_CAEEL 161 338 + 178 Gaps:23 23.70 730 27.75 1e-07 Procollagen-lysine 2-oxoglutarate 5-dioxygenase OS Caenorhabditis elegans GN let-268 PE 1 SV 1
blastp_uniprot_sprot sp|O60568|PLOD3_HUMAN 160 338 + 179 Gaps:22 23.44 738 29.48 3e-07 Procollagen-lysine 2-oxoglutarate 5-dioxygenase 3 OS Homo sapiens GN PLOD3 PE 1 SV 1
blastp_uniprot_sprot sp|Q5R6K5|PLOD3_PONAB 160 338 + 179 Gaps:22 23.44 738 29.48 3e-07 Procollagen-lysine 2-oxoglutarate 5-dioxygenase 3 OS Pongo abelii GN PLOD3 PE 2 SV 1
blastp_uniprot_sprot sp|P24802|PLOD1_CHICK 148 338 + 191 Gaps:37 25.48 730 30.11 5e-06 Procollagen-lysine 2-oxoglutarate 5-dioxygenase 1 OS Gallus gallus GN PLOD1 PE 1 SV 1
rpsblast_cdd gnl|CDD|197834 176 346 + 171 Gaps:20 100.00 165 29.09 5e-22 smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
rpsblast_kog gnl|CDD|37182 38 350 + 313 Gaps:29 80.96 415 33.93 2e-76 KOG1971 KOG1971 KOG1971 Lysyl hydroxylase [Posttranslational modification protein turnover chaperones].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 167 346 180 SM00702 none Prolyl 4-hydroxylase alpha subunit homologues. IPR006620
ProSiteProfiles 248 347 100 PS51471 none Fe(2+) 2-oxoglutarate dioxygenase domain profile. IPR005123
PANTHER 26 346 321 PTHR24014:SF4 none none none
PANTHER 26 346 321 PTHR24014 none none none
Coils 25 51 27 Coil none none none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting