Protein : Qrob_P0371550.2 Q. robur
Protein Identifier  ? Qrob_P0371550.2 Organism . Name  Quercus robur
Score  5.3 Score Type  egn
Protein Description  (M=50) K01051 - pectinesterase [EC:3.1.1.11] Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 558  
Kegg Orthology  K01051
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103950325 12 555 + 544 Gaps:54 99.47 567 39.18 1e-124 pectinesterase-like
blastp_kegg lcl|pxb:103959085 12 555 + 544 Gaps:54 99.47 567 38.83 5e-124 pectinesterase-like
blastp_kegg lcl|mdm:103452731 12 555 + 544 Gaps:53 99.47 566 38.72 5e-122 pectinesterase-like
blastp_kegg lcl|vvi:100242515 15 555 + 541 Gaps:57 98.95 570 39.01 2e-120 putative pectinesterase/pectinesterase inhibitor 28-like
blastp_kegg lcl|atr:s00040p00188020 16 555 + 540 Gaps:72 95.90 586 38.08 2e-115 AMTR_s00040p00188020 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa003528mg 47 555 + 509 Gaps:52 93.13 568 38.00 4e-115 hypothetical protein
blastp_kegg lcl|pmum:103323313 47 555 + 509 Gaps:52 93.13 568 37.81 6e-115 pectinesterase-like
blastp_kegg lcl|csv:101220540 13 555 + 543 Gaps:64 99.65 567 37.70 3e-113 putative pectinesterase/pectinesterase inhibitor 28-like
blastp_kegg lcl|vvi:100245002 13 555 + 543 Gaps:54 99.65 565 35.52 5e-112 probable pectinesterase/pectinesterase inhibitor 21-like
blastp_kegg lcl|rcu:RCOM_1003640 14 557 + 544 Gaps:59 99.47 570 36.68 2e-110 Pectinesterase-3 precursor putative (EC:3.1.1.11)
blastp_pdb 1xg2_A 231 556 + 326 Gaps:25 98.74 317 41.85 5e-73 mol:protein length:317 Pectinesterase 1
blastp_pdb 1gq8_A 229 555 + 327 Gaps:21 98.43 319 39.17 3e-67 mol:protein length:319 PECTINESTERASE
blastp_uniprot_sprot sp|Q7Y201|PME13_ARATH 54 556 + 503 Gaps:39 82.08 614 35.52 5e-92 Probable pectinesterase/pectinesterase inhibitor 13 OS Arabidopsis thaliana GN PME13 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SMY6|PME45_ARATH 54 556 + 503 Gaps:44 84.24 609 35.09 1e-90 Putative pectinesterase/pectinesterase inhibitor 45 OS Arabidopsis thaliana GN PME45 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GX86|PME21_ARATH 5 557 + 553 Gaps:53 84.01 669 33.63 1e-89 Probable pectinesterase/pectinesterase inhibitor 21 OS Arabidopsis thaliana GN PME21 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FJ21|PME58_ARATH 4 551 + 548 Gaps:58 98.77 571 34.22 5e-89 Probable pectinesterase/pectinesterase inhibitor 58 OS Arabidopsis thaliana GN PME58 PE 2 SV 1
blastp_uniprot_sprot sp|Q3E8Z8|PME28_ARATH 5 557 + 553 Gaps:55 76.23 732 33.15 8e-89 Putative pectinesterase/pectinesterase inhibitor 28 OS Arabidopsis thaliana GN PME28 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M9W7|PME22_ARATH 54 555 + 502 Gaps:57 93.00 543 35.45 1e-85 Putative pectinesterase/pectinesterase inhibitor 22 OS Arabidopsis thaliana GN PME22 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SG77|PME24_ARATH 16 555 + 540 Gaps:63 95.72 561 35.38 5e-85 Putative pectinesterase/pectinesterase inhibitor 24 OS Arabidopsis thaliana GN PME24 PE 3 SV 1
blastp_uniprot_sprot sp|Q43143|PMEU1_SOLLC 22 555 + 534 Gaps:66 95.71 583 32.26 1e-82 Pectinesterase/pectinesterase inhibitor U1 OS Solanum lycopersicum GN PMEU1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FF78|PME46_ARATH 22 553 + 532 Gaps:67 93.79 564 34.40 1e-81 Probable pectinesterase/pectinesterase inhibitor 46 OS Arabidopsis thaliana GN PME46 PE 2 SV 1
blastp_uniprot_sprot sp|O49006|PME3_ARATH 33 555 + 523 Gaps:73 93.92 592 33.09 2e-81 Pectinesterase/pectinesterase inhibitor 3 OS Arabidopsis thaliana GN PME3 PE 2 SV 2
rpsblast_cdd gnl|CDD|178346 18 556 + 539 Gaps:83 95.97 596 35.14 1e-105 PLN02745 PLN02745 Putative pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|201593 231 540 + 310 Gaps:21 99.66 298 42.42 6e-96 pfam01095 Pectinesterase Pectinesterase.
rpsblast_cdd gnl|CDD|178087 16 555 + 540 Gaps:68 95.93 565 36.90 1e-91 PLN02468 PLN02468 putative pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|165942 31 555 + 525 Gaps:54 94.71 548 36.03 3e-88 PLN02301 PLN02301 pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|177948 17 555 + 539 Gaps:71 95.22 586 34.77 1e-85 PLN02314 PLN02314 pectinesterase.
rpsblast_cdd gnl|CDD|177827 118 555 + 438 Gaps:57 80.34 529 37.88 2e-82 PLN02170 PLN02170 probable pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|178570 18 555 + 538 Gaps:57 97.73 572 33.81 8e-82 PLN02990 PLN02990 Probable pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|177864 5 557 + 553 Gaps:63 83.28 670 32.44 2e-81 PLN02217 PLN02217 probable pectinesterase/pectinesterase inhibitor.

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 50 195 146 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
SUPERFAMILY 227 553 327 SSF51126 none none IPR011050
Gene3D 228 553 326 G3DSA:2.160.20.10 none none IPR012334
Phobius 12 38 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 39 557 519 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
TIGRFAM 48 196 149 TIGR01614 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" PME_inhib: pectinesterase inhibitor domain IPR006501
Pfam 231 540 310 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
Pfam 54 195 142 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
PANTHER 327 557 231 PTHR31707 none none none
PANTHER 3 309 307 PTHR31707 none none none
SUPERFAMILY 55 197 143 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Gene3D 55 198 144 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501

1 Localization

Analysis Start End Length
TMHMM 13 35 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting