Protein : Qrob_P0367150.2 Q. robur
Protein Identifier  ? Qrob_P0367150.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=13) PTHR11064 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 144  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0046982 protein heterodimerization activity Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261380 1 136 + 136 Gaps:6 53.06 245 99.23 3e-86 nuclear transcription factor Y subunit B-3-like
blastp_kegg lcl|rcu:RCOM_0059990 1 135 + 135 Gaps:7 70.33 182 96.88 1e-81 ccaat-binding transcription factor subunit A putative
blastp_kegg lcl|cit:102616254 1 123 + 123 Gaps:1 56.22 217 96.72 3e-79 nuclear transcription factor Y subunit B-2-like
blastp_kegg lcl|cmo:103502105 1 135 + 135 Gaps:8 63.50 200 94.49 7e-79 nuclear transcription factor Y subunit B-3
blastp_kegg lcl|csv:101231948 1 135 + 135 Gaps:8 63.18 201 94.49 8e-79 nuclear transcription factor Y subunit B-3-like
blastp_kegg lcl|csv:101219076 1 135 + 135 Gaps:8 63.18 201 94.49 8e-79 nuclear transcription factor Y subunit B-3-like
blastp_kegg lcl|vvi:100251431 1 140 + 140 Gaps:8 62.86 210 90.15 9e-79 nuclear transcription factor Y subunit B-3-like
blastp_kegg lcl|mdm:103421701 1 127 + 127 Gaps:1 59.26 216 91.41 6e-78 nuclear transcription factor Y subunit B-3-like
blastp_kegg lcl|tcc:TCM_002410 1 125 + 125 Gaps:1 58.88 214 92.86 1e-77 Nuclear transcription factor Y subunit B-3
blastp_kegg lcl|pop:POPTR_0014s16580g 1 135 + 135 Gaps:11 69.23 182 96.03 8e-77 POPTRDRAFT_1100015 hypothetical protein
blastp_pdb 1n1j_A 22 114 + 93 none 100.00 93 74.19 1e-47 mol:protein length:93 NF-YB
blastp_pdb 1jfi_B 9 113 + 105 Gaps:7 54.75 179 34.69 7e-14 mol:protein length:179 Transcription Regulator NC2 beta chain
blastp_pdb 2bym_D 24 113 + 90 none 70.31 128 35.56 4e-11 mol:protein length:128 CHRAC-14
blastp_pdb 2bym_B 24 113 + 90 none 70.31 128 35.56 4e-11 mol:protein length:128 CHRAC-14
blastp_pdb 2byk_D 24 113 + 90 none 70.31 128 35.56 4e-11 mol:protein length:128 CHRAC-14
blastp_pdb 2byk_B 24 113 + 90 none 70.31 128 35.56 4e-11 mol:protein length:128 CHRAC-14
blastp_uniprot_sprot sp|O23310|NFYB3_ARATH 1 127 + 127 Gaps:4 76.40 161 88.62 2e-74 Nuclear transcription factor Y subunit B-3 OS Arabidopsis thaliana GN NFYB3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FGJ3|NFYB2_ARATH 1 133 + 133 Gaps:2 71.05 190 78.52 1e-65 Nuclear transcription factor Y subunit B-2 OS Arabidopsis thaliana GN NFYB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q60EQ4|NFYB3_ORYSJ 23 128 + 106 none 57.30 185 82.08 8e-61 Nuclear transcription factor Y subunit B-3 OS Oryza sativa subsp. japonica GN NFYB3 PE 1 SV 2
blastp_uniprot_sprot sp|P25209|NFYB_MAIZE 23 118 + 96 none 53.63 179 88.54 2e-60 Nuclear transcription factor Y subunit B OS Zea mays GN NFY2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYK4|NFYB8_ARATH 1 139 + 139 Gaps:7 82.08 173 66.90 3e-60 Nuclear transcription factor Y subunit B-8 OS Arabidopsis thaliana GN NFYB8 PE 2 SV 1
blastp_uniprot_sprot sp|Q67XJ2|NFYBA_ARATH 21 139 + 119 Gaps:2 66.48 176 73.50 1e-59 Nuclear transcription factor Y subunit B-10 OS Arabidopsis thaliana GN NFYB10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SLG0|NFYB1_ARATH 1 134 + 134 Gaps:11 97.16 141 66.42 1e-57 Nuclear transcription factor Y subunit B-1 OS Arabidopsis thaliana GN NFYB1 PE 1 SV 2
blastp_uniprot_sprot sp|Q5QMG3|NFYB2_ORYSJ 1 118 + 118 Gaps:5 63.48 178 75.22 5e-56 Nuclear transcription factor Y subunit B-2 OS Oryza sativa subsp. japonica GN NFYB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIT9|NFYB7_ARATH 24 119 + 96 none 44.65 215 84.38 6e-56 Nuclear transcription factor Y subunit B-7 OS Arabidopsis thaliana GN NFYB7 PE 2 SV 1
blastp_uniprot_sprot sp|Q65XK1|NFYB4_ORYSJ 10 118 + 109 none 76.22 143 67.89 1e-50 Nuclear transcription factor Y subunit B-4 OS Oryza sativa subsp. japonica GN NFYB4 PE 2 SV 2
rpsblast_cdd gnl|CDD|201453 28 93 + 66 Gaps:1 100.00 65 53.85 2e-22 pfam00808 CBFD_NFYB_HMF Histone-like transcription factor (CBF/NF-Y) and archaeal histone. This family includes archaebacterial histones and histone like transcription factors from eukaryotes.
rpsblast_cdd gnl|CDD|32219 24 103 + 80 Gaps:2 85.71 91 35.90 2e-14 COG2036 HHT1 Histones H3 and H4 [Chromatin structure and dynamics].
rpsblast_cdd gnl|CDD|34751 30 121 + 92 none 62.16 148 31.52 3e-11 COG5150 COG5150 Class 2 transcription repressor NC2 beta subunit (Dr1) [Transcription].
rpsblast_kog gnl|CDD|36087 1 142 + 142 Gaps:3 86.31 168 71.72 7e-53 KOG0869 KOG0869 KOG0869 CCAAT-binding factor subunit A (HAP3) [Transcription].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 19 124 106 G3DSA:1.10.20.10 none none IPR009072
SUPERFAMILY 26 128 103 SSF47113 none none IPR009072
PRINTS 57 75 19 PR00615 none CCAAT-binding transcription factor subunit A signature none
PRINTS 95 113 19 PR00615 none CCAAT-binding transcription factor subunit A signature none
PRINTS 76 94 19 PR00615 none CCAAT-binding transcription factor subunit A signature none
Pfam 29 93 65 PF00808 none Histone-like transcription factor (CBF/NF-Y) and archaeal histone IPR003958
ProSitePatterns 60 76 17 PS00685 none NF-YB/HAP3 subunit signature. IPR003956
PANTHER 1 131 131 PTHR11064 none none none

0 Localization

0 Qtllist

0 Targeting