Protein : Qrob_P0357710.2 Q. robur

Protein Identifier  ? Qrob_P0357710.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=1) KOG1495//KOG1496 - Lactate dehydrogenase [Energy production and conversion]. // Malate dehydrogenase [Energy production and conversion]. Code Enzyme  EC:1.1.1.37
Gene Prediction Quality  validated Protein length 

Sequence

Length: 277  
Kegg Orthology  K00025

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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO:0006108 malate metabolic process The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle.
GO:0016615 malate dehydrogenase activity Catalysis of the reversible conversion of pyruvate or oxaloacetate to malate.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10021075mg 1 275 + 275 Gaps:56 99.70 332 61.63 1e-133 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1609380 1 275 + 275 Gaps:56 99.70 332 62.24 5e-132 malate dehydrogenase putative (EC:1.1.1.37)
blastp_kegg lcl|cit:102615934 34 275 + 242 Gaps:22 72.13 366 71.59 5e-131 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|cmo:103483128 34 275 + 242 Gaps:22 72.53 364 71.59 2e-130 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|csv:101221189 34 275 + 242 Gaps:22 72.53 364 71.59 3e-130 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|vvi:100256452 34 275 + 242 Gaps:22 79.52 332 70.45 2e-129 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|sot:102585937 35 275 + 241 Gaps:22 79.22 332 70.34 4e-129 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|gmx:100783188 34 275 + 242 Gaps:22 70.78 373 70.45 1e-128 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|pop:POPTR_0002s14270g 34 275 + 242 Gaps:22 79.52 332 70.08 2e-128 POPTRDRAFT_551994 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa008423mg 1 275 + 275 Gaps:56 99.70 332 60.12 3e-128 hypothetical protein
blastp_pdb 5mdh_B 35 271 + 237 Gaps:23 78.08 333 51.15 2e-81 mol:protein length:333 MALATE DEHYDROGENASE
blastp_pdb 5mdh_A 35 271 + 237 Gaps:23 78.08 333 51.15 2e-81 mol:protein length:333 MALATE DEHYDROGENASE
blastp_pdb 4mdh_B 35 271 + 237 Gaps:23 77.84 334 51.15 2e-81 mol:protein length:334 CYTOPLASMIC MALATE DEHYDROGENASE
blastp_pdb 4mdh_A 35 271 + 237 Gaps:23 77.84 334 51.15 2e-81 mol:protein length:334 CYTOPLASMIC MALATE DEHYDROGENASE
blastp_pdb 3d5t_D 34 269 + 236 Gaps:25 76.44 331 45.06 4e-66 mol:protein length:331 Malate dehydrogenase
blastp_pdb 3d5t_C 34 269 + 236 Gaps:25 76.44 331 45.06 4e-66 mol:protein length:331 Malate dehydrogenase
blastp_pdb 3d5t_B 34 269 + 236 Gaps:25 76.44 331 45.06 4e-66 mol:protein length:331 Malate dehydrogenase
blastp_pdb 3d5t_A 34 269 + 236 Gaps:25 76.44 331 45.06 4e-66 mol:protein length:331 Malate dehydrogenase
blastp_pdb 1wzi_B 37 274 + 238 Gaps:27 77.98 327 42.75 4e-61 mol:protein length:327 Malate dehydrogenase
blastp_pdb 1wzi_A 37 274 + 238 Gaps:27 77.98 327 42.75 4e-61 mol:protein length:327 Malate dehydrogenase
blastp_uniprot_sprot sp|Q08062|MDHC_MAIZE 1 276 + 276 Gaps:56 100.00 332 57.83 3e-124 Malate dehydrogenase cytoplasmic OS Zea mays PE 1 SV 2
blastp_uniprot_sprot sp|Q7XDC8|MDHC_ORYSJ 1 275 + 275 Gaps:56 99.70 332 57.10 5e-123 Malate dehydrogenase cytoplasmic OS Oryza sativa subsp. japonica GN Os10g0478200 PE 1 SV 3
blastp_uniprot_sprot sp|Q9FSF0|MDH_TOBAC 1 275 + 275 Gaps:56 99.70 332 57.40 2e-122 Malate dehydrogenase OS Nicotiana tabacum GN MD1 PE 1 SV 1
blastp_uniprot_sprot sp|O48905|MDHC_MEDSA 1 275 + 275 Gaps:56 99.70 332 56.80 3e-121 Malate dehydrogenase cytoplasmic OS Medicago sativa GN CMDH PE 1 SV 1
blastp_uniprot_sprot sp|O24047|MDHC_MESCR 34 275 + 242 Gaps:22 79.52 332 66.29 1e-120 Malate dehydrogenase cytoplasmic OS Mesembryanthemum crystallinum GN MDH PE 2 SV 1
blastp_uniprot_sprot sp|Q9SML8|MDHC_BETVU 34 275 + 242 Gaps:22 79.52 332 64.77 2e-118 Malate dehydrogenase cytoplasmic OS Beta vulgaris GN NR1 PE 1 SV 1
blastp_uniprot_sprot sp|P57106|MDHC2_ARATH 1 275 + 275 Gaps:56 99.70 332 56.80 2e-117 Malate dehydrogenase cytoplasmic 2 OS Arabidopsis thaliana GN At5g43330 PE 2 SV 1
blastp_uniprot_sprot sp|P93819|MDHC1_ARATH 1 275 + 275 Gaps:56 99.70 332 56.50 3e-117 Malate dehydrogenase cytoplasmic 1 OS Arabidopsis thaliana GN At1g04410 PE 1 SV 2
blastp_uniprot_sprot sp|O88989|MDHC_RAT 35 271 + 237 Gaps:23 77.84 334 51.92 2e-82 Malate dehydrogenase cytoplasmic OS Rattus norvegicus GN Mdh1 PE 1 SV 3
blastp_uniprot_sprot sp|P14152|MDHC_MOUSE 35 271 + 237 Gaps:23 77.84 334 51.92 3e-82 Malate dehydrogenase cytoplasmic OS Mus musculus GN Mdh1 PE 1 SV 3

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 32 121 90 G3DSA:3.40.50.720 none none IPR016040
SUPERFAMILY 4 121 118 SSF51735 none none none
SUPERFAMILY 123 275 153 SSF56327 none none IPR015955
Pfam 33 119 87 PF00056 none lactate/malate dehydrogenase, NAD binding domain IPR001236
Gene3D 209 275 67 G3DSA:3.90.110.10 none none IPR015955
Gene3D 122 208 87 G3DSA:3.90.110.10 none none IPR015955
Pfam 123 210 88 PF02866 none lactate/malate dehydrogenase, alpha/beta C-terminal domain IPR022383
PANTHER 34 275 242 PTHR23382 "KEGG:00020+1.1.1.37","KEGG:00270+1.1.1.37","KEGG:00620+1.1.1.37","KEGG:00630+1.1.1.37","KEGG:00680+1.1.1.37","KEGG:00710+1.1.1.37","KEGG:00720+1.1.1.37","MetaCyc:PWY-1622","MetaCyc:PWY-5392","MetaCyc:PWY-561","MetaCyc:PWY-5690","MetaCyc:PWY-5913","MetaCyc:PWY-6728","MetaCyc:PWY-6969","MetaCyc:PWY-7115","MetaCyc:PWY-7383";signature_desc=MALATE DEHYDROGENASE none IPR010945

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting