Protein : Qrob_P0356530.2 Q. robur
Protein Identifier  ? Qrob_P0356530.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=5) 1.14.12.20 - Pheophorbide a oxygenase. Code Enzyme  EC:1.14.12.20
Gene Prediction Quality  validated Protein length 

Sequence

Length: 517  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051537 2 iron, 2 sulfur cluster binding Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
GO:0010277 chlorophyllide a oxygenase [overall] activity Catalysis of the reactions: chlorophyllide a + O2 + NADPH + H+ = 7-hydroxychlorophyllide a + H2O + NADP+; and 7-hydroxychlorophyllide a + O2 + NADPH + H+ = chlorophyllide b + 2 H2O + NADP+.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103324200 1 516 + 516 Gaps:28 100.00 536 71.46 0.0 protochlorophyllide-dependent translocon component 52 chloroplastic
blastp_kegg lcl|pxb:103954046 1 516 + 516 Gaps:29 100.00 537 68.34 0.0 protochlorophyllide-dependent translocon component 52 chloroplastic-like
blastp_kegg lcl|pxb:103954047 1 516 + 516 Gaps:30 100.00 536 68.10 0.0 protochlorophyllide-dependent translocon component 52 chloroplastic-like
blastp_kegg lcl|tcc:TCM_040033 1 516 + 516 Gaps:37 100.00 535 66.92 0.0 ACD1-like
blastp_kegg lcl|pper:PRUPE_ppa004005mg 1 516 + 516 Gaps:28 100.00 536 71.27 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0445980 1 516 + 516 Gaps:44 100.00 552 67.03 0.0 pheophorbide A oxygenase putative
blastp_kegg lcl|mtr:MTR_8g085840 4 516 + 513 Gaps:36 100.00 529 68.05 0.0 Pheophorbide a oxygenase
blastp_kegg lcl|vvi:100263831 1 516 + 516 Gaps:36 100.00 532 68.05 0.0 protochlorophyllide-dependent translocon component 52 chloroplastic-like
blastp_kegg lcl|mdm:103414997 1 516 + 516 Gaps:30 100.00 538 65.61 0.0 protochlorophyllide-dependent translocon component 52 chloroplastic
blastp_kegg lcl|pvu:PHAVU_002G236700g 1 516 + 516 Gaps:36 100.00 528 68.18 0.0 hypothetical protein
blastp_pdb 3gts_C 130 210 + 81 Gaps:7 21.20 349 40.54 5e-08 mol:protein length:349 DdmC
blastp_pdb 3gts_B 130 210 + 81 Gaps:7 21.20 349 40.54 5e-08 mol:protein length:349 DdmC
blastp_pdb 3gts_A 130 210 + 81 Gaps:7 21.20 349 40.54 5e-08 mol:protein length:349 DdmC
blastp_pdb 3gte_C 130 210 + 81 Gaps:7 21.20 349 40.54 5e-08 mol:protein length:349 DdmC
blastp_pdb 3gte_B 130 210 + 81 Gaps:7 21.20 349 40.54 5e-08 mol:protein length:349 DdmC
blastp_pdb 3gte_A 130 210 + 81 Gaps:7 21.20 349 40.54 5e-08 mol:protein length:349 DdmC
blastp_pdb 3gob_C 130 210 + 81 Gaps:7 21.20 349 40.54 5e-08 mol:protein length:349 DdmC
blastp_pdb 3gob_B 130 210 + 81 Gaps:7 21.20 349 40.54 5e-08 mol:protein length:349 DdmC
blastp_pdb 3gob_A 130 210 + 81 Gaps:7 21.20 349 40.54 5e-08 mol:protein length:349 DdmC
blastp_pdb 3gl2_C 130 210 + 81 Gaps:7 21.20 349 40.54 5e-08 mol:protein length:349 DdmC
blastp_uniprot_sprot sp|Q8W496|PTC52_ARATH 3 514 + 512 Gaps:54 99.11 559 54.69 0.0 Protochlorophyllide-dependent translocon component 52 chloroplastic OS Arabidopsis thaliana GN PTC52 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FYC2|PAO_ARATH 70 514 + 445 Gaps:56 86.96 537 34.05 3e-67 Pheophorbide a oxygenase chloroplastic OS Arabidopsis thaliana GN PAO PE 1 SV 1
blastp_uniprot_sprot sp|O49931|TIC55_PEA 69 499 + 431 Gaps:92 83.00 553 28.32 3e-38 Protein TIC 55 chloroplastic OS Pisum sativum GN TIC55 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SK50|TIC55_ARATH 73 457 + 385 Gaps:89 76.81 539 28.50 9e-35 Protein TIC 55 chloroplastic OS Arabidopsis thaliana GN TIC55 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZWM5|CAO_CHLRE 130 403 + 274 Gaps:58 41.24 645 26.69 3e-13 Chlorophyllide a oxygenase chloroplastic OS Chlamydomonas reinhardtii GN CAO PE 2 SV 2
blastp_uniprot_sprot sp|Q9XJ38|CAO_DUNSA 130 411 + 282 Gaps:32 59.18 463 25.55 2e-12 Chlorophyllide a oxygenase chloroplastic OS Dunaliella salina GN CAO PE 2 SV 1
blastp_uniprot_sprot sp|Q8S7E1|CAO_ORYSJ 90 408 + 319 Gaps:55 56.93 541 25.97 2e-11 Chlorophyllide a oxygenase chloroplastic OS Oryza sativa subsp. japonica GN CAO PE 2 SV 1
blastp_uniprot_sprot sp|Q9MBA1|CAO_ARATH 90 408 + 319 Gaps:55 57.46 536 25.32 3e-11 Chlorophyllide a oxygenase chloroplastic OS Arabidopsis thaliana GN CAO PE 1 SV 1
blastp_uniprot_sprot sp|H9N291|NDMD_PSEPU 88 374 + 287 Gaps:58 43.71 588 28.02 1e-09 Oxidoreductase NdmD OS Pseudomonas putida GN ndmD PE 4 SV 1
blastp_uniprot_sprot sp|Q44256|CBAA_COMTE 90 201 + 112 Gaps:4 25.00 432 31.48 1e-08 3-chlorobenzoate-3 4-dioxygenase oxygenase subunit OS Comamonas testosteroni GN cbaA PE 3 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 483 503 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 89 175 87 PF00355 none Rieske [2Fe-2S] domain IPR017941
Phobius 472 482 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 279 383 105 PF08417 none Pheophorbide a oxygenase IPR013626
SUPERFAMILY 80 206 127 SSF50022 none none IPR017941
Gene3D 89 207 119 G3DSA:2.102.10.10 none none IPR017941
PANTHER 56 436 381 PTHR21266:SF25 none none none
PANTHER 56 436 381 PTHR21266 none none none
SUPERFAMILY 196 411 216 SSF55961 none none none
Phobius 1 449 449 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 450 471 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 90 200 111 PS51296 none Rieske [2Fe-2S] iron-sulfur domain profile. IPR017941
Phobius 504 516 13 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
TMHMM 484 503 19
TMHMM 449 471 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting