Protein : Qrob_P0348850.2 Q. robur
Protein Identifier  ? Qrob_P0348850.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=7) K07300 - Ca2+:H+ antiporter Gene Prediction Quality  validated
Protein length 

Sequence

Length: 366  
Kegg Orthology  K07300
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0008324 cation transmembrane transporter activity Enables the transfer of cation from one side of the membrane to the other.
GO:0006816 calcium ion transport The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0015369 calcium:proton antiporter activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + H+(out) = Ca2+(out) + H+(in).

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007470mg 32 365 + 334 Gaps:19 86.61 366 86.12 0.0 hypothetical protein
blastp_kegg lcl|pmum:103319295 32 365 + 334 Gaps:19 70.44 450 86.12 0.0 vacuolar cation/proton exchanger 5
blastp_kegg lcl|cit:102629460 32 365 + 334 Gaps:18 70.46 457 81.68 3e-178 vacuolar cation/proton exchanger 5-like
blastp_kegg lcl|cic:CICLE_v10008243mg 32 365 + 334 Gaps:18 70.61 456 81.37 1e-177 hypothetical protein
blastp_kegg lcl|mdm:103416916 32 363 + 332 Gaps:19 70.47 447 84.13 1e-176 vacuolar cation/proton exchanger 5
blastp_kegg lcl|mdm:103418710 32 363 + 332 Gaps:19 70.47 447 84.13 1e-176 vacuolar cation/proton exchanger 5-like
blastp_kegg lcl|tcc:TCM_030534 32 365 + 334 Gaps:22 70.64 453 82.81 2e-174 Cation exchanger 2 isoform 1
blastp_kegg lcl|pop:POPTR_0011s16970g 32 355 + 324 Gaps:18 79.38 388 82.14 1e-173 cation exchanger 2 family protein
blastp_kegg lcl|pxb:103940400 32 365 + 334 Gaps:20 70.82 449 83.02 3e-173 vacuolar cation/proton exchanger 5-like
blastp_kegg lcl|fve:101296644 32 359 + 328 Gaps:18 70.27 444 82.05 4e-173 vacuolar cation/proton exchanger 5-like
blastp_uniprot_sprot sp|Q8L783|CAX5_ARATH 32 359 + 328 Gaps:19 70.52 441 80.71 1e-172 Vacuolar cation/proton exchanger 5 OS Arabidopsis thaliana GN CAX5 PE 2 SV 1
blastp_uniprot_sprot sp|Q39254|CAX2_ARATH 32 357 + 326 Gaps:19 70.07 441 80.26 6e-171 Vacuolar cation/proton exchanger 2 OS Arabidopsis thaliana GN CAX2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LFZ8|CAX6_ARATH 32 358 + 327 Gaps:23 68.75 448 77.60 3e-160 Putative vacuolar cation/proton exchanger 6 OS Arabidopsis thaliana GN CAX6 PE 3 SV 3
blastp_uniprot_sprot sp|Q6K1C4|CAX3_ORYSJ 32 360 + 329 Gaps:19 74.82 417 75.96 2e-158 Vacuolar cation/proton exchanger 3 OS Oryza sativa subsp. japonica GN CAX3 PE 2 SV 2
blastp_uniprot_sprot sp|Q5KQN0|CAX2_ORYSJ 32 361 + 330 Gaps:21 71.17 437 76.21 3e-157 Vacuolar cation/proton exchanger 2 OS Oryza sativa subsp. japonica GN CAX2 PE 2 SV 2
blastp_uniprot_sprot sp|Q6YXZ1|CAX4_ORYSJ 21 363 + 343 Gaps:30 77.63 447 65.42 1e-141 Putative vacuolar cation/proton exchanger 4 OS Oryza sativa subsp. japonica GN Os02g0138900 PE 3 SV 1
blastp_uniprot_sprot sp|Q93Z81|CAX3_ARATH 32 359 + 328 Gaps:23 68.63 459 53.97 1e-90 Vacuolar cation/proton exchanger 3 OS Arabidopsis thaliana GN CAX3 PE 1 SV 1
blastp_uniprot_sprot sp|Q39253|CAX1_ARATH 32 357 + 326 Gaps:31 67.17 463 51.77 4e-90 Vacuolar cation/proton exchanger 1 OS Arabidopsis thaliana GN CAX1 PE 1 SV 3
blastp_uniprot_sprot sp|Q5TKG3|CAX1B_ORYSJ 32 361 + 330 Gaps:22 70.20 453 50.31 3e-89 Vacuolar cation/proton exchanger 1b OS Oryza sativa subsp. japonica GN CAX1b PE 2 SV 1
blastp_uniprot_sprot sp|Q769E5|CAX1A_ORYSJ 32 356 + 325 Gaps:34 68.96 451 54.02 3e-89 Vacuolar cation/proton exchanger 1a OS Oryza sativa subsp. japonica GN CAX1a PE 1 SV 1
rpsblast_cdd gnl|CDD|129926 32 350 + 319 Gaps:22 81.37 365 50.84 5e-81 TIGR00846 caca2 calcium/proton exchanger. The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously having been identified in animals plants yeast archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This Hmm is generated from the calcium ion/proton exchangers of the CacA family.
rpsblast_cdd gnl|CDD|129474 31 350 + 320 Gaps:20 85.96 349 46.00 2e-74 TIGR00378 cax calcium/proton exchanger (cax).
rpsblast_cdd gnl|CDD|30736 32 352 + 321 Gaps:23 81.52 368 35.00 7e-58 COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|190072 32 349 + 318 Gaps:22 100.00 135 40.74 2e-19 pfam01699 Na_Ca_ex Sodium/calcium exchanger protein. This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells cardiac myocytes epithelial cells neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms NCX1 NCX2 and NCX3.
rpsblast_cdd gnl|CDD|30876 34 351 + 318 Gaps:50 85.00 320 25.00 8e-13 COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism].
rpsblast_kog gnl|CDD|36611 32 357 + 326 Gaps:20 71.20 441 62.42 1e-110 KOG1397 KOG1397 KOG1397 Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism].

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 88 98 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 99 122 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 34 53 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 54 64 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
TIGRFAM 31 350 320 TIGR00846 none caca2: calcium/proton exchanger IPR004713
Phobius 208 228 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 123 133 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 253 272 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 326 331 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 32 364 333 PTHR31503 none none none
Phobius 332 351 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 308 325 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 33 33 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
TIGRFAM 30 350 321 TIGR00378 none cax: calcium/proton exchanger IPR004798
Phobius 352 365 14 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 229 233 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 154 207 54 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 273 296 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 65 87 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 134 153 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 234 252 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 216 346 131 PF01699 "Reactome:REACT_15518" Sodium/calcium exchanger protein IPR004837
Pfam 24 153 130 PF01699 "Reactome:REACT_15518" Sodium/calcium exchanger protein IPR004837
Phobius 297 307 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

9 Localization

Analysis Start End Length
TMHMM 66 88 22
TMHMM 32 51 19
TMHMM 332 351 19
TMHMM 276 298 22
TMHMM 100 119 19
TMHMM 134 153 19
TMHMM 308 325 17
TMHMM 207 229 22
TMHMM 233 255 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting