Protein : Qrob_P0340110.2 Q. robur
Protein Identifier  ? Qrob_P0340110.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR13691:SF5 - 50S RIBOSOMAL PROTEIN L2 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 208  
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0015934 large ribosomal subunit The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
GO:0016740 transferase activity Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102625872 3 201 + 199 Gaps:13 93.15 219 76.47 2e-103 60S ribosomal protein L2 mitochondrial-like
blastp_kegg lcl|cic:CICLE_v10016628mg 3 201 + 199 Gaps:13 93.15 219 75.98 2e-102 hypothetical protein
blastp_kegg lcl|tcc:TCM_017084 1 207 + 207 Gaps:10 100.00 203 75.37 9e-102 50S ribosomal protein L2 putative
blastp_kegg lcl|pop:POPTR_0017s04050g 5 207 + 203 Gaps:4 96.63 208 74.63 7e-99 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_002G275900g 18 207 + 190 none 94.06 202 74.21 7e-98 hypothetical protein
blastp_kegg lcl|vvi:100266379 1 195 + 195 Gaps:9 99.48 193 77.08 5e-96 60S ribosomal protein L2 mitochondrial-like
blastp_kegg lcl|rcu:RCOM_1120050 31 197 + 167 Gaps:2 68.46 241 83.03 5e-95 50S ribosomal protein L2 putative
blastp_kegg lcl|pop:POPTR_0007s00710g 4 207 + 204 Gaps:2 96.71 213 69.90 7e-93 hypothetical protein
blastp_kegg lcl|cam:101511083 5 207 + 203 Gaps:14 95.94 197 70.90 1e-89 60S ribosomal protein L2 mitochondrial-like
blastp_kegg lcl|sly:101252912 47 207 + 161 Gaps:3 80.20 202 80.86 7e-89 60S ribosomal protein L2 mitochondrial-like
blastp_pdb 3bbo_E 57 194 + 138 Gaps:6 49.81 269 52.24 2e-37 mol:protein length:269 Ribosomal Protein L2
blastp_pdb 3pyv_C 57 207 + 151 Gaps:8 52.77 271 52.45 7e-37 mol:protein length:271 50S ribosomal protein L2
blastp_pdb 3pyt_C 57 207 + 151 Gaps:8 52.77 271 52.45 7e-37 mol:protein length:271 50S ribosomal protein L2
blastp_pdb 3pyr_C 57 207 + 151 Gaps:8 52.77 271 52.45 7e-37 mol:protein length:271 50S ribosomal protein L2
blastp_pdb 3pyo_C 57 207 + 151 Gaps:8 52.77 271 52.45 7e-37 mol:protein length:271 50S ribosomal protein L2
blastp_pdb 4dhc_D 57 207 + 151 Gaps:8 51.81 276 52.45 7e-37 mol:protein length:276 50S Ribosomal Protein L2
blastp_pdb 4dha_D 57 207 + 151 Gaps:8 51.81 276 52.45 7e-37 mol:protein length:276 50S Ribosomal Protein L2
blastp_pdb 4abs_D 57 207 + 151 Gaps:8 51.81 276 52.45 7e-37 mol:protein length:276 50S RIBOSOMAL PROTEIN L2
blastp_pdb 3zvp_D 57 207 + 151 Gaps:8 51.81 276 52.45 7e-37 mol:protein length:276 50S RIBOSOMAL PROTEIN L2
blastp_pdb 3uzn_D 57 207 + 151 Gaps:8 51.81 276 52.45 7e-37 mol:protein length:276 50S ribosomal protein L2
blastp_uniprot_sprot sp|P92812|RM02_ORYSJ 56 201 + 146 Gaps:5 28.09 502 69.50 6e-60 60S ribosomal protein L2 mitochondrial OS Oryza sativa subsp. japonica GN RPL2 PE 2 SV 2
blastp_uniprot_sprot sp|Q2F969|RM02_ORYSI 56 201 + 146 Gaps:5 28.09 502 69.50 6e-60 60S ribosomal protein L2 mitochondrial OS Oryza sativa subsp. indica GN RPL2 PE 2 SV 2
blastp_uniprot_sprot sp|P0C8K6|RM02_ORYSA 56 201 + 146 Gaps:5 28.09 502 69.50 6e-60 60S ribosomal protein L2 mitochondrial OS Oryza sativa GN RPL2 PE 2 SV 1
blastp_uniprot_sprot sp|P26859|RM02_MARPO 48 206 + 159 Gaps:5 31.14 501 60.26 9e-53 60S ribosomal protein L2 mitochondrial OS Marchantia polymorpha GN RPL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q6HPQ5|RL2_BACHK 47 200 + 154 Gaps:7 53.99 276 54.36 4e-44 50S ribosomal protein L2 OS Bacillus thuringiensis subsp. konkukian (strain 97-27) GN rplB PE 3 SV 1
blastp_uniprot_sprot sp|Q63H87|RL2_BACCZ 47 200 + 154 Gaps:7 53.99 276 54.36 4e-44 50S ribosomal protein L2 OS Bacillus cereus (strain ZK / E33L) GN rplB PE 3 SV 1
blastp_uniprot_sprot sp|B7HQU7|RL2_BACC7 47 200 + 154 Gaps:7 53.99 276 54.36 4e-44 50S ribosomal protein L2 OS Bacillus cereus (strain AH187) GN rplB PE 3 SV 1
blastp_uniprot_sprot sp|C1ET42|RL2_BACC3 47 200 + 154 Gaps:7 53.99 276 54.36 4e-44 50S ribosomal protein L2 OS Bacillus cereus (strain 03BB102) GN rplB PE 3 SV 1
blastp_uniprot_sprot sp|Q73F93|RL2_BACC1 47 200 + 154 Gaps:7 53.99 276 54.36 4e-44 50S ribosomal protein L2 OS Bacillus cereus (strain ATCC 10987) GN rplB PE 3 SV 1
blastp_uniprot_sprot sp|B7JKC2|RL2_BACC0 47 200 + 154 Gaps:7 53.99 276 54.36 4e-44 50S ribosomal protein L2 OS Bacillus cereus (strain AH820) GN rplB PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 61 193 133 PF03947 none Ribosomal Proteins L2, C-terminal domain IPR022669
SUPERFAMILY 62 196 135 SSF50104 none none IPR008991
Gene3D 58 132 75 G3DSA:2.30.30.30 none none IPR014722
Gene3D 133 201 69 G3DSA:4.10.950.10 none none IPR014726
PANTHER 57 200 144 PTHR13691:SF5 none none IPR005880
ProSitePatterns 155 166 12 PS00467 none Ribosomal protein L2 signature. IPR022671
PANTHER 57 200 144 PTHR13691 none none IPR002171

0 Localization

0 Qtllist

0 Targeting