Protein : Qrob_P0322100.2 Q. robur
Protein Identifier  ? Qrob_P0322100.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) KOG0054//KOG0055//KOG0056//KOG0057//KOG0058 - Multidrug resistance-associated protein/mitoxantrone resistance protein ABC superfamily [Secondary metabolites biosynthesis transport and catabolism]. // Multidrug/pheromone exporter ABC superfamily [Secondary metabolites biosynthesis transport and catabolism]. // Heavy metal exporter HMT1 ABC superfamily [Inorganic ion transport and metabolism]. // Mitochondrial Fe/S cluster exporter ABC superfamily [Intracellular trafficking secretion and vesicular transport]. // Peptide exporter ABC superfamily [Intracellular trafficking secretion and vesicular transport]. Code Enzyme  EC:3.6.3.44
Gene Prediction Quality  validated Protein length 

Sequence

Length: 298  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0042626 ATPase activity, coupled to transmembrane movement of substances Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
GO:0016887 ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_1557s00200g 16 297 + 282 Gaps:31 75.42 419 71.52 8e-108 hypothetical protein
blastp_kegg lcl|cit:102620957 16 230 + 215 Gaps:31 44.73 550 67.07 2e-105 ABC transporter C family member 10-like
blastp_kegg lcl|rcu:RCOM_1581350 16 297 + 282 Gaps:31 21.34 1481 72.47 1e-104 multidrug resistance-associated protein 1 3 (mrp1 3) abc-transoprter putative (EC:1.3.1.74)
blastp_kegg lcl|pvu:PHAVU_007G078000g 16 297 + 282 Gaps:31 21.38 1478 69.62 6e-103 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_007G077900g 16 297 + 282 Gaps:31 21.34 1481 69.62 1e-102 hypothetical protein
blastp_kegg lcl|gmx:100784336 16 297 + 282 Gaps:31 21.31 1483 71.20 1e-102 ABC transporter C family member 10-like
blastp_kegg lcl|cam:101502549 16 297 + 282 Gaps:31 21.42 1475 70.89 4e-102 ABC transporter C family member 10-like
blastp_kegg lcl|gmx:100817665 16 297 + 282 Gaps:31 21.37 1479 69.94 5e-102 ABC transporter C family member 10-like
blastp_kegg lcl|cic:CICLE_v10004145mg 16 297 + 282 Gaps:31 21.31 1483 71.52 6e-102 hypothetical protein
blastp_kegg lcl|cit:102616643 16 297 + 282 Gaps:31 21.31 1483 71.52 6e-102 ABC transporter C family member 10-like
blastp_pdb 3gd7_D 116 230 + 115 Gaps:1 29.23 390 42.11 7e-24 mol:protein length:390 Fusion complex of Cystic fibrosis transmembra
blastp_pdb 3gd7_C 116 230 + 115 Gaps:1 29.23 390 42.11 7e-24 mol:protein length:390 Fusion complex of Cystic fibrosis transmembra
blastp_pdb 3gd7_B 116 230 + 115 Gaps:1 29.23 390 42.11 7e-24 mol:protein length:390 Fusion complex of Cystic fibrosis transmembra
blastp_pdb 3gd7_A 116 230 + 115 Gaps:1 29.23 390 42.11 7e-24 mol:protein length:390 Fusion complex of Cystic fibrosis transmembra
blastp_pdb 3qf4_A 16 216 + 201 Gaps:29 39.18 587 26.09 1e-18 mol:protein length:587 ABC transporter ATP-binding protein
blastp_pdb 3qf4_B 16 230 + 215 Gaps:48 40.64 598 30.45 9e-15 mol:protein length:598 Uncharacterized ABC transporter ATP-binding p
blastp_pdb 1xef_D 122 213 + 92 none 38.17 241 32.61 1e-11 mol:protein length:241 Alpha-hemolysin translocation ATP-binding pro
blastp_pdb 1xef_C 122 213 + 92 none 38.17 241 32.61 1e-11 mol:protein length:241 Alpha-hemolysin translocation ATP-binding pro
blastp_pdb 1xef_B 122 213 + 92 none 38.17 241 32.61 1e-11 mol:protein length:241 Alpha-hemolysin translocation ATP-binding pro
blastp_pdb 1xef_A 122 213 + 92 none 38.17 241 32.61 1e-11 mol:protein length:241 Alpha-hemolysin translocation ATP-binding pro
blastp_uniprot_sprot sp|Q9LYS2|AB10C_ARATH 16 297 + 282 Gaps:31 21.75 1453 67.41 8e-96 ABC transporter C family member 10 OS Arabidopsis thaliana GN ABCC10 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M1C7|AB9C_ARATH 16 290 + 275 Gaps:31 20.98 1506 48.42 6e-71 ABC transporter C family member 9 OS Arabidopsis thaliana GN ABCC9 PE 2 SV 2
blastp_uniprot_sprot sp|Q7GB25|AB5C_ARATH 16 293 + 278 Gaps:31 21.07 1514 49.53 5e-69 ABC transporter C family member 5 OS Arabidopsis thaliana GN ABCC5 PE 2 SV 2
blastp_uniprot_sprot sp|Q7FB56|AB15C_ARATH 16 290 + 275 Gaps:31 30.01 1053 47.47 6e-69 Putative ABC transporter C family member 15 OS Arabidopsis thaliana GN ABCC15 PE 5 SV 2
blastp_uniprot_sprot sp|Q9LK64|AB3C_ARATH 16 293 + 278 Gaps:31 21.07 1514 47.65 2e-65 ABC transporter C family member 3 OS Arabidopsis thaliana GN ABCC3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8LGU1|AB8C_ARATH 16 293 + 278 Gaps:37 22.75 1464 46.85 3e-64 ABC transporter C family member 8 OS Arabidopsis thaliana GN ABCC8 PE 2 SV 3
blastp_uniprot_sprot sp|Q9LK62|AB7C_ARATH 16 290 + 275 Gaps:31 21.17 1493 44.62 1e-61 ABC transporter C family member 7 OS Arabidopsis thaliana GN ABCC7 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VZZ4|AB6C_ARATH 16 290 + 275 Gaps:31 21.56 1466 45.25 1e-60 ABC transporter C family member 6 OS Arabidopsis thaliana GN ABCC6 PE 2 SV 3
blastp_uniprot_sprot sp|Q9LZJ5|AB14C_ARATH 16 290 + 275 Gaps:32 20.47 1539 47.62 3e-55 ABC transporter C family member 14 OS Arabidopsis thaliana GN ABCC14 PE 1 SV 1
blastp_uniprot_sprot sp|Q7DM58|AB4C_ARATH 16 290 + 275 Gaps:34 20.78 1516 47.94 4e-55 ABC transporter C family member 4 OS Arabidopsis thaliana GN ABCC4 PE 1 SV 2

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 16 294 279 PTHR24223 none none none
Gene3D 227 288 62 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 112 282 171 SSF52540 none none IPR027417
PANTHER 16 294 279 PTHR24223:SF192 none none none
SUPERFAMILY 15 104 90 SSF90123 none none IPR011527
Gene3D 122 226 105 G3DSA:3.40.50.300 none none IPR027417
Pfam 141 230 90 PF00005 none ABC transporter IPR003439

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

0 Targeting