Protein : Qrob_P0315160.2 Q. robur
Protein Identifier  ? Qrob_P0315160.2 Organism . Name  Quercus robur
Protein Description  (M=4) 2.3.1.119 - Icosanoyl-CoA synthase. Alias (in v1)  Qrob_P0933150.1
Code Enzyme  EC:2.3.1.199, EC:2.3.1.119 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 512  
Kegg Orthology  K15397
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0006633 fatty acid biosynthetic process The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
GO:0008610 lipid biosynthetic process The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa004269mg 1 509 + 509 Gaps:8 99.61 519 88.20 0.0 hypothetical protein
blastp_kegg lcl|cit:102609752 1 511 + 511 Gaps:1 100.00 512 88.09 0.0 3-ketoacyl-CoA synthase 11-like
blastp_kegg lcl|cic:CICLE_v10007916mg 1 511 + 511 Gaps:1 93.60 547 87.89 0.0 hypothetical protein
blastp_kegg lcl|pmum:103341006 1 510 + 510 Gaps:8 99.81 519 87.64 0.0 3-ketoacyl-CoA synthase 11
blastp_kegg lcl|pxb:103939811 1 509 + 509 Gaps:5 99.61 516 87.55 0.0 3-ketoacyl-CoA synthase 11-like
blastp_kegg lcl|fve:101312957 1 509 + 509 Gaps:4 99.61 515 86.55 0.0 3-ketoacyl-CoA synthase 11-like
blastp_kegg lcl|tcc:TCM_037982 1 511 + 511 Gaps:3 100.00 514 87.74 0.0 3-ketoacyl-CoA synthase
blastp_kegg lcl|pxb:103939135 1 509 + 509 Gaps:5 99.61 516 87.35 0.0 3-ketoacyl-CoA synthase 11-like
blastp_kegg lcl|pxb:103963004 1 509 + 509 Gaps:7 99.61 518 86.63 0.0 3-ketoacyl-CoA synthase 11
blastp_kegg lcl|mdm:103424934 1 509 + 509 Gaps:7 99.61 518 86.43 0.0 3-ketoacyl-CoA synthase 11
blastp_pdb 1tee_D 194 483 + 290 Gaps:40 66.67 393 26.34 6e-08 mol:protein length:393 pks18
blastp_pdb 1tee_C 194 483 + 290 Gaps:40 66.67 393 26.34 6e-08 mol:protein length:393 pks18
blastp_pdb 1tee_B 194 483 + 290 Gaps:40 66.67 393 26.34 6e-08 mol:protein length:393 pks18
blastp_pdb 1tee_A 194 483 + 290 Gaps:40 66.67 393 26.34 6e-08 mol:protein length:393 pks18
blastp_pdb 3tsy_A 237 471 + 235 Gaps:55 21.65 979 32.08 8e-08 mol:protein length:979 Fusion Protein 4-coumarate--CoA ligase 1 Res
blastp_pdb 1ted_D 194 483 + 290 Gaps:40 66.67 393 26.34 8e-08 mol:protein length:393 pks18
blastp_pdb 1ted_C 194 483 + 290 Gaps:40 66.67 393 26.34 8e-08 mol:protein length:393 pks18
blastp_pdb 1ted_B 194 483 + 290 Gaps:40 66.67 393 26.34 8e-08 mol:protein length:393 pks18
blastp_pdb 1ted_A 194 483 + 290 Gaps:40 66.67 393 26.34 8e-08 mol:protein length:393 pks18
blastp_pdb 2h84_B 212 472 + 261 Gaps:34 62.30 374 24.89 1e-06 mol:protein length:374 Steely1
blastp_uniprot_sprot sp|O48780|KCS11_ARATH 9 511 + 503 Gaps:1 98.62 509 82.87 0.0 3-ketoacyl-CoA synthase 11 OS Arabidopsis thaliana GN KCS11 PE 2 SV 1
blastp_uniprot_sprot sp|Q5XEP9|KCS17_ARATH 15 511 + 497 Gaps:9 95.45 528 70.44 0.0 3-ketoacyl-CoA synthase 17 OS Arabidopsis thaliana GN KCS17 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FG87|KCS19_ARATH 25 511 + 487 Gaps:6 93.19 529 72.41 0.0 3-ketoacyl-CoA synthase 19 OS Arabidopsis thaliana GN KCS19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LN49|KCS4_ARATH 15 503 + 489 Gaps:1 94.57 516 68.85 0.0 3-ketoacyl-CoA synthase 4 OS Arabidopsis thaliana GN KCS4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIX1|KCS9_ARATH 17 505 + 489 Gaps:1 95.31 512 66.39 0.0 3-ketoacyl-CoA synthase 9 OS Arabidopsis thaliana GN KCS9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MAM3|KCS1_ARATH 17 505 + 489 Gaps:6 93.75 528 62.22 0.0 3-ketoacyl-CoA synthase 1 OS Arabidopsis thaliana GN KCS1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XF43|KCS6_ARATH 19 508 + 490 Gaps:1 98.39 497 60.12 0.0 3-ketoacyl-CoA synthase 6 OS Arabidopsis thaliana GN CUT1 PE 1 SV 1
blastp_uniprot_sprot sp|O65677|KCS2_ARATH 30 505 + 476 Gaps:7 96.71 487 62.42 0.0 Probable 3-ketoacyl-CoA synthase 2 OS Arabidopsis thaliana GN KCS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C6L5|KCS5_ARATH 19 508 + 490 Gaps:1 99.39 492 58.90 0.0 3-ketoacyl-CoA synthase 5 OS Arabidopsis thaliana GN KCS5 PE 1 SV 1
blastp_uniprot_sprot sp|Q570B4|KCS10_ARATH 4 503 + 500 Gaps:31 95.45 550 53.90 0.0 3-ketoacyl-CoA synthase 10 OS Arabidopsis thaliana GN FDH PE 1 SV 2

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 75 96 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 94 300 207 G3DSA:3.40.47.10 none none IPR016038
Phobius 228 248 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 310 483 174 G3DSA:3.40.47.10 none none IPR016038
Phobius 33 55 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 511 511 PTHR31561:SF3 none none none
Phobius 299 511 213 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 400 480 81 PF08541 "KEGG:00061+2.3.1.180","MetaCyc:PWY-4381","UniPathway:UPA00094" 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IPR013747
Phobius 1 32 32 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 94 383 290 PF08392 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" FAE1/Type III polyketide synthase-like protein IPR013601
SUPERFAMILY 88 306 219 SSF53901 none none IPR016039
PIRSF 21 511 491 PIRSF036417 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" none IPR012392
PANTHER 1 511 511 PTHR31561 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094";signature_desc=FAMILY NOT NAMED none IPR012392
Phobius 97 227 131 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 56 74 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 281 298 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 311 480 170 SSF53901 none none IPR016039
Phobius 249 280 32 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

3 Localization

Analysis Start End Length
TMHMM 33 55 22
TMHMM 226 248 22
TMHMM 75 97 22

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting