Protein : Qrob_P0304810.2 Q. robur
Protein Identifier  ? Qrob_P0304810.2 Organism . Name  Quercus robur
Protein Description  (M=2) PTHR11748//PTHR11748:SF17 - D-LACTATE DEHYDROGENASE // SUBFAMILY NOT NAMED Alias (in v1)  Qrob_P0636890.1
Code Enzyme  EC:1.5.99.12 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 517  
Kegg Orthology  K00279
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0 Synonyms

8 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity Catalysis of the reaction: UDP-N-acetylmuramate + NADP+ = UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + NADPH + H+.
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0009690 cytokinin metabolic process The chemical reactions and pathways involving cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.
GO:0019139 cytokinin dehydrogenase activity Catalysis of the reaction: N6-dimethylallyladenine + acceptor + H2O = adenine + 3-methylbut-2-enal + reduced electron acceptor.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0006s23760g 1 515 + 515 Gaps:3 99.42 521 73.94 0.0 POPTRDRAFT_819456 cytokinin oxidase family protein
blastp_kegg lcl|tcc:TCM_037384 1 516 + 516 Gaps:9 99.22 515 77.30 0.0 Cytokinin oxidase
blastp_kegg lcl|pper:PRUPE_ppa004276mg 1 515 + 515 Gaps:9 99.42 519 76.55 0.0 hypothetical protein
blastp_kegg lcl|pxb:103952784 1 515 + 515 Gaps:9 98.85 520 75.88 0.0 cytokinin dehydrogenase 7-like
blastp_kegg lcl|vvi:100245801 1 514 + 514 Gaps:5 99.22 515 73.39 0.0 cytokinin dehydrogenase 7-like
blastp_kegg lcl|mdm:103440905 1 515 + 515 Gaps:13 99.42 513 76.27 0.0 cytokinin dehydrogenase 7-like
blastp_kegg lcl|mdm:103455779 1 515 + 515 Gaps:9 99.42 517 75.29 0.0 cytokinin dehydrogenase 7
blastp_kegg lcl|rcu:RCOM_0707270 1 514 + 514 Gaps:8 99.23 520 73.26 0.0 gulonolactone oxidase putative (EC:1.5.99.12)
blastp_kegg lcl|pxb:103927480 1 515 + 515 Gaps:13 99.42 513 76.67 0.0 cytokinin dehydrogenase 7-like
blastp_kegg lcl|gmx:100783374 1 515 + 515 Gaps:11 98.64 513 73.52 0.0 cytokinin dehydrogenase 7-like
blastp_pdb 2q4w_A 2 514 + 513 Gaps:8 99.43 524 66.03 0.0 mol:protein length:524 Cytokinin dehydrogenase 7
blastp_pdb 2exr_A 2 514 + 513 Gaps:8 99.43 524 66.03 0.0 mol:protein length:524 Cytokinin dehydrogenase 7
blastp_pdb 3dq0_A 32 513 + 482 Gaps:39 95.93 516 45.05 1e-125 mol:protein length:516 Cytokinin dehydrogenase 1
blastp_pdb 3c0p_A 32 513 + 482 Gaps:39 95.93 516 45.05 1e-125 mol:protein length:516 Cytokinin dehydrogenase 1
blastp_pdb 3bw7_A 32 513 + 482 Gaps:39 95.93 516 45.05 1e-125 mol:protein length:516 Cytokinin dehydrogenase 1
blastp_pdb 2qkn_A 32 513 + 482 Gaps:39 95.93 516 45.05 1e-125 mol:protein length:516 Cytokinin dehydrogenase 1
blastp_pdb 1w1s_A 32 513 + 482 Gaps:39 92.70 534 45.05 3e-125 mol:protein length:534 CYTOKININ DEHYDROGENASE
blastp_pdb 1w1r_A 32 513 + 482 Gaps:39 92.70 534 45.05 3e-125 mol:protein length:534 CYTOKININ DEHYDROGENASE 1
blastp_pdb 1w1q_A 32 513 + 482 Gaps:39 92.70 534 45.05 3e-125 mol:protein length:534 CYTOKININ DEHYDROGENASE 1
blastp_pdb 1w1o_A 32 513 + 482 Gaps:39 92.70 534 45.05 3e-125 mol:protein length:534 CYTOKININ DEHYDROGENASE 1
blastp_uniprot_sprot sp|Q9FUJ1|CKX7_ARATH 1 514 + 514 Gaps:8 99.62 524 66.09 0.0 Cytokinin dehydrogenase 7 OS Arabidopsis thaliana GN CKX7 PE 1 SV 1
blastp_uniprot_sprot sp|Q6Z955|CKX11_ORYSJ 50 514 + 465 Gaps:5 90.73 518 58.09 0.0 Cytokinin dehydrogenase 11 OS Oryza sativa subsp. japonica GN CKX11 PE 2 SV 1
blastp_uniprot_sprot sp|O22213|CKX1_ARATH 25 514 + 490 Gaps:12 84.87 575 49.59 4e-161 Cytokinin dehydrogenase 1 OS Arabidopsis thaliana GN CKX1 PE 1 SV 1
blastp_uniprot_sprot sp|Q67YU0|CKX5_ARATH 32 512 + 481 Gaps:15 89.63 540 50.83 2e-151 Cytokinin dehydrogenase 5 OS Arabidopsis thaliana GN CKX5 PE 2 SV 1
blastp_uniprot_sprot sp|Q5JLP4|CKX4_ORYSJ 19 514 + 496 Gaps:19 93.19 529 48.88 7e-151 Cytokinin dehydrogenase 4 OS Oryza sativa subsp. japonica GN CKX4 PE 2 SV 1
blastp_uniprot_sprot sp|Q75K78|CKX9_ORYSJ 25 514 + 490 Gaps:18 92.90 521 47.31 1e-149 Cytokinin dehydrogenase 9 OS Oryza sativa subsp. japonica GN CKX9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LY71|CKX6_ARATH 28 514 + 487 Gaps:11 91.56 533 46.93 4e-147 Cytokinin dehydrogenase 6 OS Arabidopsis thaliana GN CKX6 PE 2 SV 2
blastp_uniprot_sprot sp|Q5ZAY9|CKX5_ORYSJ 47 512 + 466 Gaps:15 88.95 534 52.00 1e-141 Cytokinin dehydrogenase 5 OS Oryza sativa subsp. japonica GN CKX5 PE 2 SV 1
blastp_uniprot_sprot sp|Q6YW50|CKX7_ORYSJ 39 513 + 475 Gaps:13 90.84 524 44.75 8e-129 Cytokinin dehydrogenase 7 OS Oryza sativa subsp. japonica GN CKX7 PE 3 SV 1
blastp_uniprot_sprot sp|Q6YW51|CKX6_ORYSJ 39 515 + 477 Gaps:20 91.27 527 45.11 2e-128 Cytokinin dehydrogenase 6 OS Oryza sativa subsp. japonica GN CKX6 PE 3 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 56 116 61 G3DSA:3.30.43.10 none none IPR016167
Gene3D 123 229 107 G3DSA:3.30.465.10 none none IPR016169
Pfam 232 512 281 PF09265 "KEGG:00908+1.5.99.12" Cytokinin dehydrogenase 1, FAD and cytokinin binding IPR015345
Gene3D 234 471 238 G3DSA:3.40.462.10 "KEGG:00908+1.5.99.12" none IPR016170
SUPERFAMILY 45 230 186 SSF56176 none none IPR016166
Pfam 59 200 142 PF01565 "KEGG:00520+1.3.1.98","KEGG:00550+1.3.1.98","MetaCyc:PWY-6386","MetaCyc:PWY-6387","UniPathway:UPA00219" FAD binding domain IPR006094
SUPERFAMILY 232 512 281 SSF55103 none none IPR016164
ProSiteProfiles 55 231 177 PS51387 none PCMH-type FAD-binding domain profile. IPR016166
PANTHER 31 515 485 PTHR11748:SF17 none none none
PANTHER 31 515 485 PTHR11748 none none none

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting