Protein : Qrob_P0299690.2 Q. robur
Protein Identifier  ? Qrob_P0299690.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR31561:SF2 - 3-KETOACYL-COA SYNTHASE 10 (PTHR31561:SF2) Code Enzyme  EC:2.3.1.199
Gene Prediction Quality  validated Protein length 

Sequence

Length: 355  
Kegg Orthology  K15397
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0006633 fatty acid biosynthetic process The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103415388 1 350 + 350 none 64.70 541 90.86 0.0 3-ketoacyl-CoA synthase 10-like
blastp_kegg lcl|pxb:103952998 1 350 + 350 none 62.39 561 90.86 0.0 3-ketoacyl-CoA synthase 10-like
blastp_kegg lcl|pper:PRUPE_ppa004011mg 1 350 + 350 none 65.42 535 90.57 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0708020 1 350 + 350 Gaps:1 65.60 532 89.40 0.0 acyltransferase putative
blastp_kegg lcl|mdm:103440610 1 350 + 350 none 64.70 541 89.14 0.0 3-ketoacyl-CoA synthase 10
blastp_kegg lcl|pmum:103320669 1 350 + 350 none 64.58 542 90.00 0.0 3-ketoacyl-CoA synthase 10
blastp_kegg lcl|csv:101217359 1 350 + 350 none 65.91 531 88.86 0.0 3-ketoacyl-CoA synthase 10-like
blastp_kegg lcl|csv:101230159 1 350 + 350 none 65.91 531 88.86 0.0 3-ketoacyl-CoA synthase 10-like
blastp_kegg lcl|cmo:103493715 1 350 + 350 none 65.91 531 88.86 0.0 3-ketoacyl-CoA synthase 10
blastp_kegg lcl|fve:101297691 1 350 + 350 none 64.81 540 89.14 0.0 3-ketoacyl-CoA synthase 10-like
blastp_pdb 1u0m_B 138 321 + 184 Gaps:14 48.69 382 26.88 5e-08 mol:protein length:382 putative polyketide synthase
blastp_pdb 1u0m_A 138 321 + 184 Gaps:14 48.69 382 26.88 5e-08 mol:protein length:382 putative polyketide synthase
blastp_uniprot_sprot sp|Q570B4|KCS10_ARATH 2 350 + 349 Gaps:4 62.73 550 86.09 0.0 3-ketoacyl-CoA synthase 10 OS Arabidopsis thaliana GN FDH PE 1 SV 2
blastp_uniprot_sprot sp|Q9LN49|KCS4_ARATH 30 350 + 321 Gaps:3 61.63 516 57.86 6e-128 3-ketoacyl-CoA synthase 4 OS Arabidopsis thaliana GN KCS4 PE 2 SV 1
blastp_uniprot_sprot sp|O48780|KCS11_ARATH 35 346 + 312 Gaps:3 60.71 509 57.61 6e-127 3-ketoacyl-CoA synthase 11 OS Arabidopsis thaliana GN KCS11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIX1|KCS9_ARATH 34 350 + 317 Gaps:11 61.33 512 54.78 4e-122 3-ketoacyl-CoA synthase 9 OS Arabidopsis thaliana GN KCS9 PE 2 SV 1
blastp_uniprot_sprot sp|Q5XEP9|KCS17_ARATH 35 350 + 316 Gaps:3 59.28 528 53.67 3e-115 3-ketoacyl-CoA synthase 17 OS Arabidopsis thaliana GN KCS17 PE 2 SV 2
blastp_uniprot_sprot sp|Q9MAM3|KCS1_ARATH 31 350 + 320 Gaps:8 60.98 528 51.55 6e-112 3-ketoacyl-CoA synthase 1 OS Arabidopsis thaliana GN KCS1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XF43|KCS6_ARATH 37 346 + 310 Gaps:7 61.77 497 53.09 3e-108 3-ketoacyl-CoA synthase 6 OS Arabidopsis thaliana GN CUT1 PE 1 SV 1
blastp_uniprot_sprot sp|O65677|KCS2_ARATH 48 346 + 299 Gaps:18 59.75 487 57.73 1e-104 Probable 3-ketoacyl-CoA synthase 2 OS Arabidopsis thaliana GN KCS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C6L5|KCS5_ARATH 37 346 + 310 Gaps:3 62.40 492 51.47 3e-102 3-ketoacyl-CoA synthase 5 OS Arabidopsis thaliana GN KCS5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FG87|KCS19_ARATH 43 346 + 304 Gaps:3 56.90 529 53.82 1e-99 3-ketoacyl-CoA synthase 19 OS Arabidopsis thaliana GN KCS19 PE 2 SV 1
rpsblast_cdd gnl|CDD|116972 114 350 + 237 Gaps:1 81.38 290 66.10 1e-123 pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases type III polyketide synthases fatty acid elongases and fatty acid condensing enzymes and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues as well as motifs involved in substrate binding.
rpsblast_cdd gnl|CDD|165836 35 346 + 312 Gaps:3 60.47 511 57.28 1e-118 PLN02192 PLN02192 3-ketoacyl-CoA synthase.
rpsblast_cdd gnl|CDD|166018 31 350 + 320 Gaps:3 63.15 502 57.41 1e-112 PLN02377 PLN02377 3-ketoacyl-CoA synthase.
rpsblast_cdd gnl|CDD|166495 31 347 + 317 Gaps:8 61.23 521 54.55 1e-110 PLN02854 PLN02854 3-ketoacyl-CoA synthase.
rpsblast_cdd gnl|CDD|178520 53 349 + 297 Gaps:17 62.76 478 44.00 6e-76 PLN02932 PLN02932 3-ketoacyl-CoA synthase.
rpsblast_cdd gnl|CDD|177808 101 349 + 249 Gaps:2 53.00 466 49.39 6e-73 PLN00415 PLN00415 3-ketoacyl-CoA synthase.
rpsblast_cdd gnl|CDD|29418 106 338 + 233 Gaps:21 62.05 361 43.75 9e-57 cd00831 CHS_like Chalcone and stilbene synthases plant-specific polyketide synthases (PKS) and related enzymes also called type III PKSs. PKS generate an array of different products dependent on the nature of the starter molecule. They share a common chemical strategy after the starter molecule is loaded onto the active site cysteine a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs using coenzyme A esters to deliver substrate to the active site but they differ in the choice of starter molecule and the number of condensation reactions..
rpsblast_cdd gnl|CDD|33230 196 318 + 123 Gaps:3 34.83 356 29.03 7e-10 COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis transport and catabolism].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 108 327 220 SSF53901 none none IPR016039
PANTHER 17 347 331 PTHR31561:SF2 none none none
Gene3D 311 346 36 G3DSA:3.40.47.10 none none IPR016038
Phobius 270 300 31 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 116 248 133 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 114 349 236 PF08392 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" FAE1/Type III polyketide synthase-like protein IPR013601
Phobius 301 318 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 95 115 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 55 75 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 76 94 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 249 269 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 17 347 331 PTHR31561 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094";signature_desc=FAMILY NOT NAMED none IPR012392
Phobius 1 54 54 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 114 310 197 G3DSA:3.40.47.10 none none IPR016038
Phobius 319 354 36 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

4 Localization

Analysis Start End Length
TMHMM 247 269 22
TMHMM 55 77 22
TMHMM 97 116 19
TMHMM 301 318 17

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting