Protein : Qrob_P0298290.2 Q. robur
Protein Identifier  ? Qrob_P0298290.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=12) PTHR32468:SF12 - CATION/H(+) ANTIPORTER 26-RELATED (PTHR32468:SF12) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 736  
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005451 monovalent cation:proton antiporter activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monovalent cation(out) + H+(in) = monovalent cation(in) + H+(out).
GO:0006813 potassium ion transport The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0006814 sodium ion transport The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0015299 solute:proton antiporter activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out).

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1187780 1 722 + 722 Gaps:8 86.09 834 77.72 0.0 Na(+)/H(+) antiporter putative
blastp_kegg lcl|cic:CICLE_v10000276mg 1 722 + 722 Gaps:10 85.58 832 77.25 0.0 hypothetical protein
blastp_kegg lcl|cit:102623470 1 722 + 722 Gaps:10 85.58 832 77.25 0.0 cation/H(+) antiporter 15-like
blastp_kegg lcl|vvi:100244861 1 735 + 735 Gaps:15 88.17 837 76.02 0.0 cation/H(+) antiporter 15-like
blastp_kegg lcl|tcc:TCM_001511 1 700 + 700 Gaps:4 84.10 830 76.79 0.0 Cation/hydrogen exchanger 15
blastp_kegg lcl|pper:PRUPE_ppa023146mg 1 735 + 735 Gaps:25 90.44 816 73.98 0.0 hypothetical protein
blastp_kegg lcl|pmum:103327126 1 735 + 735 Gaps:25 89.76 840 71.88 0.0 cation/H(+) antiporter 15
blastp_kegg lcl|mdm:103405624 1 735 + 735 Gaps:20 87.86 857 71.31 0.0 cation/H(+) antiporter 15
blastp_kegg lcl|sot:102596317 1 718 + 718 Gaps:9 84.78 841 72.65 0.0 cation/H(+) antiporter 15-like
blastp_kegg lcl|sly:101248019 1 718 + 718 Gaps:9 84.78 841 71.95 0.0 cation/H(+) antiporter 15-like
blastp_uniprot_sprot sp|Q9SIT5|CHX15_ARATH 1 723 + 723 Gaps:8 87.09 821 71.75 0.0 Cation/H(+) antiporter 15 OS Arabidopsis thaliana GN CHX15 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUN4|CHX19_ARATH 2 697 + 696 Gaps:23 84.88 800 48.60 0.0 Cation/H(+) antiporter 19 OS Arabidopsis thaliana GN CHX19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SUQ7|CHX17_ARATH 2 699 + 698 Gaps:48 86.10 820 45.61 0.0 Cation/H(+) antiporter 17 OS Arabidopsis thaliana GN CHX17 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FFR9|CHX18_ARATH 21 705 + 685 Gaps:23 84.20 810 46.33 0.0 Cation/H(+) antiporter 18 OS Arabidopsis thaliana GN CHX18 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYD4|CHX23_ARATH 1 697 + 697 Gaps:23 79.35 867 44.04 0.0 Cation/H(+) antiporter 23 chloroplastic OS Arabidopsis thaliana GN CHX23 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SKA9|CHX21_ARATH 1 706 + 706 Gaps:27 84.01 832 41.34 5e-177 Cation/H(+) antiporter 21 OS Arabidopsis thaliana GN CHX21 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M353|CHX20_ARATH 2 697 + 696 Gaps:46 86.46 842 44.51 8e-177 Cation/H(+) antiporter 20 OS Arabidopsis thaliana GN CHX20 PE 2 SV 1
blastp_uniprot_sprot sp|Q1HDT3|CHX16_ARATH 2 699 + 698 Gaps:44 85.57 811 42.22 1e-173 Cation/H(+) antiporter 16 OS Arabidopsis thaliana GN CHX16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LMJ1|CHX14_ARATH 1 710 + 710 Gaps:33 83.35 829 36.61 1e-138 Cation/H(+) antiporter 14 OS Arabidopsis thaliana GN CHX14 PE 2 SV 1
blastp_uniprot_sprot sp|O22920|CHX13_ARATH 1 707 + 707 Gaps:50 81.71 831 38.59 2e-134 Cation/H(+) symporter 13 OS Arabidopsis thaliana GN CHX13 PE 1 SV 1
rpsblast_cdd gnl|CDD|178704 1 735 + 735 Gaps:8 87.38 832 76.07 0.0 PLN03159 PLN03159 cation/H(+) antiporter 15 Provisional.
rpsblast_cdd gnl|CDD|201544 1 332 + 332 Gaps:8 87.57 370 28.09 1e-50 pfam00999 Na_H_Exchanger Sodium/hydrogen exchanger family. Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.
rpsblast_cdd gnl|CDD|30823 2 337 + 336 Gaps:11 82.87 397 26.14 3e-40 COG0475 KefB Kef-type K+ transport systems membrane components [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|162117 3 237 + 235 Gaps:7 83.52 273 22.37 3e-25 TIGR00932 2a37 transporter monovalent cation:proton antiporter-2 (CPA2) family.
rpsblast_cdd gnl|CDD|34270 6 331 + 326 Gaps:17 79.17 408 23.84 1e-11 COG4651 RosB Kef-type K+ transport system predicted NAD-binding component [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|179594 3 330 + 328 Gaps:34 51.21 621 24.84 2e-07 PRK03562 PRK03562 glutathione-regulated potassium-efflux system protein KefC Provisional.
rpsblast_kog gnl|CDD|36863 1 700 + 700 Gaps:31 89.34 769 50.22 0.0 KOG1650 KOG1650 KOG1650 Predicted K+/H+-antiporter [Inorganic ion transport and metabolism].

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 101 123 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 710 710 PTHR32468 none none none
Phobius 172 191 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 90 100 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 314 336 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 276 281 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 710 710 PTHR32468:SF12 none none IPR030153
Phobius 135 160 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 161 171 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 28 33 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 282 302 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 57 67 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 68 89 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 217 222 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 197 216 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 244 248 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 192 196 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 223 243 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 303 313 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 249 275 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 337 735 399 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 2 333 332 PF00999 none Sodium/hydrogen exchanger family IPR006153
Phobius 34 56 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 124 134 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 6 27 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

10 Localization

Analysis Start End Length
TMHMM 313 335 22
TMHMM 5 27 22
TMHMM 172 191 19
TMHMM 222 244 22
TMHMM 196 215 19
TMHMM 249 271 22
TMHMM 133 152 19
TMHMM 34 56 22
TMHMM 101 123 22
TMHMM 66 88 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 1 0.992 0.018 NON-PLANT 22