Protein : Qrob_P0297680.2 Q. robur
Protein Identifier  ? Qrob_P0297680.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=31) K01537 - Ca2+-transporting ATPase [EC:3.6.3.8] Code Enzyme  EC:3.6.3.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 842  
Kegg Orthology  K01537
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0005388 calcium-transporting ATPase activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans).
GO:0070588 calcium ion transmembrane transport A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.

49 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103451029 3 841 + 839 Gaps:8 81.41 1033 73.48 0.0 calcium-transporting ATPase 12 plasma membrane-type-like
blastp_kegg lcl|pxb:103954414 3 841 + 839 Gaps:9 81.43 1034 73.16 0.0 calcium-transporting ATPase 12 plasma membrane-type-like
blastp_kegg lcl|tcc:TCM_026363 3 841 + 839 Gaps:15 82.72 1001 73.31 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
blastp_kegg lcl|pmum:103331169 5 841 + 837 Gaps:5 82.12 1018 73.33 0.0 putative calcium-transporting ATPase 13 plasma membrane-type
blastp_kegg lcl|pper:PRUPE_ppa017146mg 5 841 + 837 Gaps:5 82.53 1013 73.09 0.0 hypothetical protein
blastp_kegg lcl|cit:102615877 3 841 + 839 Gaps:10 81.74 1024 72.16 0.0 calcium-transporting ATPase 12 plasma membrane-type-like
blastp_kegg lcl|cic:CICLE_v10003326mg 3 841 + 839 Gaps:10 81.74 1024 72.04 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10000126mg 8 841 + 834 Gaps:11 80.60 1031 72.32 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10000129mg 3 841 + 839 Gaps:10 81.74 1024 71.68 0.0 hypothetical protein
blastp_kegg lcl|vvi:100257170 31 839 + 809 Gaps:11 76.82 1057 71.18 0.0 calcium-transporting ATPase 12 plasma membrane-type-like
blastp_pdb 3ixz_A 113 828 + 716 Gaps:90 71.57 1034 29.73 1e-75 mol:protein length:1034 Potassium-transporting ATPase alpha
blastp_pdb 2xzb_A 113 828 + 716 Gaps:90 71.57 1034 29.73 1e-75 mol:protein length:1034 POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1
blastp_pdb 3kdp_C 122 828 + 707 Gaps:88 73.25 998 28.45 1e-72 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3kdp_A 122 828 + 707 Gaps:88 73.25 998 28.45 1e-72 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_C 122 828 + 707 Gaps:88 73.25 998 28.45 1e-72 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_A 122 828 + 707 Gaps:88 73.25 998 28.45 1e-72 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n2f_C 122 828 + 707 Gaps:88 73.69 992 28.45 1e-72 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n2f_A 122 828 + 707 Gaps:88 73.69 992 28.45 1e-72 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_C 122 828 + 707 Gaps:88 73.69 992 28.45 1e-72 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_A 122 828 + 707 Gaps:88 73.69 992 28.45 1e-72 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_uniprot_sprot sp|Q9LY77|ACA12_ARATH 30 841 + 812 Gaps:20 78.41 1033 63.83 0.0 Calcium-transporting ATPase 12 plasma membrane-type OS Arabidopsis thaliana GN ACA12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LIK7|ACA13_ARATH 24 839 + 816 Gaps:21 78.96 1017 64.26 0.0 Putative calcium-transporting ATPase 13 plasma membrane-type OS Arabidopsis thaliana GN ACA13 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LF79|ACA8_ARATH 90 839 + 750 Gaps:11 69.93 1074 55.66 0.0 Calcium-transporting ATPase 8 plasma membrane-type OS Arabidopsis thaliana GN ACA8 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SZR1|ACA10_ARATH 31 841 + 811 Gaps:23 77.46 1069 51.21 0.0 Calcium-transporting ATPase 10 plasma membrane-type OS Arabidopsis thaliana GN ACA10 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LU41|ACA9_ARATH 31 839 + 809 Gaps:26 75.97 1086 51.76 0.0 Calcium-transporting ATPase 9 plasma membrane-type OS Arabidopsis thaliana GN ACA9 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M2L4|ACA11_ARATH 90 839 + 750 Gaps:27 71.51 1025 47.75 0.0 Putative calcium-transporting ATPase 11 plasma membrane-type OS Arabidopsis thaliana GN ACA11 PE 1 SV 1
blastp_uniprot_sprot sp|Q2RAS0|ACA5_ORYSJ 26 839 + 814 Gaps:52 78.47 1017 47.24 0.0 Probable calcium-transporting ATPase 5 plasma membrane-type OS Oryza sativa subsp. japonica GN Os11g0140400 PE 3 SV 1
blastp_uniprot_sprot sp|O22218|ACA4_ARATH 88 839 + 752 Gaps:30 71.65 1030 47.43 0.0 Calcium-transporting ATPase 4 plasma membrane-type OS Arabidopsis thaliana GN ACA4 PE 1 SV 1
blastp_uniprot_sprot sp|Q2QY12|ACA4_ORYSJ 90 839 + 750 Gaps:30 71.22 1039 48.51 0.0 Probable calcium-transporting ATPase 4 plasma membrane-type OS Oryza sativa subsp. japonica GN Os12g0136900 PE 3 SV 1
blastp_uniprot_sprot sp|Q37145|ACA1_ARATH 92 839 + 748 Gaps:26 72.55 1020 47.43 0.0 Calcium-transporting ATPase 1 chloroplastic OS Arabidopsis thaliana GN ACA1 PE 1 SV 3

42 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 329 347 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 215 306 92 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 451 471 21 SSF56784 none none IPR023214
SUPERFAMILY 604 830 227 SSF56784 none none IPR023214
PANTHER 89 839 751 PTHR24093 none none none
Gene3D 443 655 213 G3DSA:3.40.1110.10 none none IPR023299
Phobius 371 390 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 780 792 13 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 671 681 11 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 756 775 20 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 649 660 12 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 453 467 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 277 291 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
Gene3D 167 328 162 G3DSA:2.70.150.10 none none IPR008250
Pfam 197 445 249 PF00122 none E1-E2 ATPase IPR008250
Phobius 391 411 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 455 461 7 PS00154 none E1-E2 ATPases phosphorylation site. IPR018303
Phobius 816 836 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
TIGRFAM 102 839 738 TIGR01517 none ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type IPR006408
Pfam 450 770 321 PF00702 none haloacid dehalogenase-like hydrolase IPR023214
SMART 103 183 81 SM00831 none Cation transporter/ATPase, N-terminus IPR004014
Phobius 837 841 5 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 184 194 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 195 214 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 788 813 26 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
PRINTS 607 625 19 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
PRINTS 756 772 17 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
TIGRFAM 730 836 107 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
TIGRFAM 397 480 84 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
Phobius 348 370 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

5 Localization

Analysis Start End Length
TMHMM 193 212 19
TMHMM 306 328 22
TMHMM 348 370 22
TMHMM 166 183 17
TMHMM 390 412 22

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting