Protein : Qrob_P0297190.2 Q. robur
Protein Identifier  ? Qrob_P0297190.2 Organism . Name  Quercus robur
Score  41.0 Score Type  egn
Protein Description  (M=9) K11251 - histone H2A Gene Prediction Quality  validated
Protein length 

Sequence

Length: 145  
Kegg Orthology  K11251
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0000786 nucleosome A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
GO:0046982 protein heterodimerization activity Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sita:101769640 3 144 + 142 Gaps:5 92.45 159 85.71 1e-78 histone H2A-like
blastp_kegg lcl|zma:100501869 3 144 + 142 Gaps:5 93.63 157 85.03 5e-78 uncharacterized LOC100501869
blastp_kegg lcl|cam:101514392 18 144 + 127 none 84.67 150 92.13 6e-78 probable histone H2A.2-like
blastp_kegg lcl|fve:101297708 15 144 + 130 Gaps:4 85.90 156 90.30 6e-78 histone H2A-like
blastp_kegg lcl|eus:EUTSA_v10014920mg 3 144 + 142 Gaps:3 95.39 152 84.14 3e-77 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_005G142000g 19 144 + 126 none 84.56 149 91.27 5e-77 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0390300 19 144 + 126 Gaps:1 84.67 150 93.70 5e-77 histone h2a putative
blastp_kegg lcl|rcu:RCOM_0390180 19 144 + 126 Gaps:1 84.67 150 93.70 5e-77 histone h2a putative
blastp_kegg lcl|gmx:100305705 19 144 + 126 none 84.56 149 92.06 5e-77 uncharacterized LOC100305705
blastp_kegg lcl|gmx:100803534 19 144 + 126 none 84.56 149 92.06 5e-77 histone H2A-like
blastp_pdb 3utb_G 8 133 + 126 Gaps:1 96.90 129 72.80 2e-58 mol:protein length:129 Histone H2A
blastp_pdb 3utb_C 8 133 + 126 Gaps:1 96.90 129 72.80 2e-58 mol:protein length:129 Histone H2A
blastp_pdb 3uta_G 8 133 + 126 Gaps:1 96.90 129 72.80 2e-58 mol:protein length:129 Histone H2A
blastp_pdb 3uta_C 8 133 + 126 Gaps:1 96.90 129 72.80 2e-58 mol:protein length:129 Histone H2A
blastp_pdb 3ut9_G 8 133 + 126 Gaps:1 96.90 129 72.80 2e-58 mol:protein length:129 Histone H2A
blastp_pdb 3ut9_C 8 133 + 126 Gaps:1 96.90 129 72.80 2e-58 mol:protein length:129 Histone H2A
blastp_pdb 3tu4_G 8 133 + 126 Gaps:1 96.90 129 72.80 2e-58 mol:protein length:129 Histone H2A
blastp_pdb 3tu4_C 8 133 + 126 Gaps:1 96.90 129 72.80 2e-58 mol:protein length:129 Histone H2A
blastp_pdb 3rel_G 8 133 + 126 Gaps:1 96.90 129 72.80 2e-58 mol:protein length:129 Histone H2A
blastp_pdb 3rel_C 8 133 + 126 Gaps:1 96.90 129 72.80 2e-58 mol:protein length:129 Histone H2A
blastp_uniprot_sprot sp|P19177|H2A_PETCR 15 144 + 130 Gaps:1 87.92 149 92.37 1e-79 Histone H2A OS Petroselinum crispum PE 2 SV 1
blastp_uniprot_sprot sp|Q2HU68|H2A1_MEDTR 15 144 + 130 none 87.84 148 90.00 9e-78 Probable histone H2A.1 OS Medicago truncatula GN MtrDRAFT_AC149210g1v1 PE 1 SV 1
blastp_uniprot_sprot sp|P25469|H2A1_SOLLC 4 144 + 141 Gaps:4 95.21 146 87.77 2e-76 Histone H2A.1 OS Solanum lycopersicum PE 2 SV 1
blastp_uniprot_sprot sp|Q9LZ46|H2A4_ARATH 15 144 + 130 Gaps:3 86.93 153 85.71 7e-75 Probable histone H2A.4 OS Arabidopsis thaliana GN At5g02560 PE 1 SV 1
blastp_uniprot_sprot sp|Q2HU65|H2A2_MEDTR 18 144 + 127 Gaps:4 85.62 153 87.79 1e-74 Probable histone H2A.2 OS Medicago truncatula GN MtrDRAFT_AC149210g4v1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9M531|H2A_EUPES 3 144 + 142 Gaps:4 95.42 153 84.25 4e-73 Histone H2A OS Euphorbia esula PE 2 SV 1
blastp_uniprot_sprot sp|Q1S053|H2A3_MEDTR 18 144 + 127 Gaps:4 84.87 152 87.60 5e-73 Probable histone H2A.3 OS Medicago truncatula PE 1 SV 1
blastp_uniprot_sprot sp|P40281|H2A2_PEA 18 144 + 127 none 85.23 149 84.25 6e-72 Histone H2A.2 OS Pisum sativum PE 2 SV 1
blastp_uniprot_sprot sp|P02277|H2A3_WHEAT 4 144 + 141 Gaps:4 96.03 151 77.93 1e-71 Histone H2A.2.2 OS Triticum aestivum PE 1 SV 1
blastp_uniprot_sprot sp|Q43214|H2A6_WHEAT 8 143 + 136 Gaps:7 93.92 148 81.29 6e-71 Protein H2A.6 OS Triticum aestivum GN H2A-3 PE 2 SV 3

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 21 94 74 PF00125 none Core histone H2A/H2B/H3/H4 IPR007125
ProSitePatterns 25 31 7 PS00046 none Histone H2A signature. IPR002119
PANTHER 8 140 133 PTHR23430 none none none
SMART 6 126 121 SM00414 none Histone 2A IPR002119
PRINTS 75 89 15 PR00620 none Histone H2A signature IPR002119
PRINTS 46 61 16 PR00620 none Histone H2A signature IPR002119
PRINTS 17 39 23 PR00620 none Histone H2A signature IPR002119
PRINTS 103 121 19 PR00620 none Histone H2A signature IPR002119
PRINTS 61 74 14 PR00620 none Histone H2A signature IPR002119
SUPERFAMILY 8 128 121 SSF47113 none none IPR009072
Gene3D 9 125 117 G3DSA:1.10.20.10 none none IPR009072

0 Localization

0 Qtllist

0 Targeting