Protein : Qrob_P0291850.2 Q. robur
Protein Identifier  ? Qrob_P0291850.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=9) 4.2.3.106 - (E)-beta-ocimene synthase. Code Enzyme  EC:4.2.3.106
Gene Prediction Quality  validated Protein length 

Sequence

Length: 248  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100251703 3 242 + 240 none 41.03 585 68.33 2e-117 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100260170 3 242 + 240 none 39.87 602 68.33 1e-115 myrcene synthase chloroplastic-like
blastp_kegg lcl|pmum:103329466 3 245 + 243 Gaps:5 43.28 573 68.55 1e-115 probable terpene synthase 9
blastp_kegg lcl|pmum:103329467 3 245 + 243 Gaps:5 43.36 572 68.55 4e-115 probable terpene synthase 9
blastp_kegg lcl|pper:PRUPE_ppa023532mg 3 245 + 243 Gaps:5 43.74 567 67.74 5e-114 hypothetical protein
blastp_kegg lcl|vvi:100253797 3 242 + 240 none 39.87 602 67.92 4e-113 myrcene synthase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0007s02810g 3 245 + 243 Gaps:3 45.39 542 67.48 2e-112 POPTRDRAFT_763916 hypothetical protein
blastp_kegg lcl|mdm:103417108 3 245 + 243 Gaps:4 40.36 612 64.78 1e-108 probable terpene synthase 9
blastp_kegg lcl|fve:101307148 3 245 + 243 Gaps:2 42.10 582 66.12 2e-108 (-)-alpha-terpineol synthase-like
blastp_kegg lcl|rcu:RCOM_1545320 3 245 + 243 Gaps:1 41.78 584 64.34 4e-107 (R)-limonene synthase putative (EC:4.2.3.20)
blastp_pdb 3n0g_B 3 244 + 242 Gaps:1 43.78 555 51.44 3e-81 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 3 244 + 242 Gaps:1 43.78 555 51.44 3e-81 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 3 244 + 242 Gaps:1 43.78 555 51.44 3e-81 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 3 244 + 242 Gaps:1 43.78 555 51.44 3e-81 mol:protein length:555 Isoprene synthase
blastp_pdb 2onh_B 3 242 + 240 Gaps:2 44.57 543 46.28 2e-68 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 3 242 + 240 Gaps:2 44.57 543 46.28 2e-68 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 3 242 + 240 Gaps:2 44.57 543 46.28 2e-68 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 3 242 + 240 Gaps:2 44.57 543 46.28 2e-68 mol:protein length:543 4S-limonene synthase
blastp_pdb 2j5c_B 3 242 + 240 Gaps:4 42.53 569 46.28 2e-67 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2j5c_A 3 242 + 240 Gaps:4 42.53 569 46.28 2e-67 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_uniprot_sprot sp|B9RPM3|TPS9_RICCO 3 245 + 243 Gaps:1 41.78 584 64.34 1e-108 Probable terpene synthase 9 OS Ricinus communis GN TPS9 PE 3 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 3 242 + 240 Gaps:1 40.85 590 51.45 1e-84 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 3 242 + 240 none 40.54 592 51.67 2e-82 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q6EJ97|ISPS_PUEML 3 244 + 242 Gaps:1 39.97 608 49.79 2e-80 Isoprene synthase chloroplastic OS Pueraria montana var. lobata GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|Q7XAS7|ISPS_POPTM 3 244 + 242 Gaps:1 40.84 595 51.03 3e-80 Isoprene synthase chloroplastic OS Populus tremuloides GN ISPS PE 3 SV 1
blastp_uniprot_sprot sp|Q50L36|ISPS_POPAL 3 244 + 242 Gaps:1 40.84 595 51.03 3e-80 Isoprene synthase chloroplastic OS Populus alba GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|Q9AR86|ISPS_POPCN 3 244 + 242 Gaps:1 40.84 595 51.03 6e-80 Isoprene synthase chloroplastic OS Populus canescens GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 3 242 + 240 Gaps:1 43.74 551 51.04 1e-78 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 3 242 + 240 Gaps:1 40.37 597 49.38 2e-78 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|B9RHP7|TPS11_RICCO 3 242 + 240 Gaps:9 42.13 572 51.04 1e-74 Probable terpene synthase 11 OS Ricinus communis GN TPS11 PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 113 246 134 G3DSA:1.10.600.10 none none IPR008949
PANTHER 3 242 240 PTHR31225 none none none
PANTHER 3 242 240 PTHR31225:SF0 none none none
Pfam 102 246 145 PF03936 none Terpene synthase family, metal binding domain IPR005630
Gene3D 2 112 111 G3DSA:1.50.30.10 none none IPR001906
SUPERFAMILY 99 245 147 SSF48576 none none IPR008949
Pfam 2 72 71 PF01397 none Terpene synthase, N-terminal domain IPR001906
SUPERFAMILY 2 96 95 SSF48239 none none IPR008930

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1

0 Targeting