Protein : Qrob_P0291390.2 Q. robur
Protein Identifier  ? Qrob_P0291390.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10119:SF15 - GLUTAMINYL-TRNA SYNTHETASE Code Enzyme  EC:6.1.1.17
Gene Prediction Quality  validated Protein length 

Sequence

Length: 722  
Kegg Orthology  K01885
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0 Synonyms

10 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO:0016876 ligase activity, forming aminoacyl-tRNA and related compounds Catalysis of the joining of an amino acid and a nucleic acid (usually tRNA) or poly(ribitol phosphate), with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate. The reaction forms an aminoacyl-tRNA or a related compound.
GO:0043039 tRNA aminoacylation The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules.
GO:0004818 glutamate-tRNA ligase activity Catalysis of the reaction: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu).
GO:0006424 glutamyl-tRNA aminoacylation The process of coupling glutamate to glutamyl-tRNA, catalyzed by glutamyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'- adenosine residue of the tRNA.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102616460 1 721 + 721 Gaps:15 100.00 722 82.27 0.0 probable glutamate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|cic:CICLE_v10000427mg 1 721 + 721 Gaps:14 100.00 721 82.52 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_007G206700g 4 721 + 718 Gaps:16 99.86 733 80.33 0.0 hypothetical protein
blastp_kegg lcl|gmx:100791298 4 721 + 718 Gaps:17 99.86 732 80.30 0.0 probable glutamate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|gmx:100809656 4 721 + 718 Gaps:16 99.86 733 79.64 0.0 probable glutamate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|pop:POPTR_0005s00300g 4 721 + 718 Gaps:15 99.86 728 80.61 0.0 hypothetical protein
blastp_kegg lcl|vvi:100263087 8 717 + 710 Gaps:23 99.32 736 79.48 0.0 probable glutamyl-tRNA synthetase cytoplasmic-like
blastp_kegg lcl|csv:101218513 4 721 + 718 Gaps:14 99.86 729 79.26 0.0 probable glutamate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|cmo:103492081 4 721 + 718 Gaps:15 99.86 730 79.01 0.0 probable glutamate--tRNA ligase cytoplasmic
blastp_kegg lcl|mtr:MTR_1g085150 1 721 + 721 Gaps:16 100.00 735 77.69 0.0 Bifunctional aminoacyl-tRNA synthetase
blastp_pdb 2re8_A 204 706 + 503 Gaps:27 93.53 556 36.54 2e-90 mol:protein length:556 Glutaminyl-tRNA synthetase
blastp_pdb 2rd2_A 204 706 + 503 Gaps:27 93.53 556 36.54 2e-90 mol:protein length:556 Glutaminyl-tRNA synthetase
blastp_pdb 1nyl_A 204 706 + 503 Gaps:27 96.47 539 36.35 2e-89 mol:protein length:539 Glutaminyl-tRNA synthetase
blastp_pdb 1exd_A 204 706 + 503 Gaps:27 94.89 548 36.35 3e-89 mol:protein length:548 GLUTAMINYL-TRNA SYNTHETASE
blastp_pdb 1euy_A 204 706 + 503 Gaps:27 94.89 548 36.35 3e-89 mol:protein length:548 GLUTAMINYL-TRNA SYNTHETASE
blastp_pdb 1euq_A 204 706 + 503 Gaps:27 94.89 548 36.35 3e-89 mol:protein length:548 GLUTAMINYL-TRNA SYNTHETASE
blastp_pdb 1zjw_A 204 706 + 503 Gaps:27 94.03 553 36.35 3e-89 mol:protein length:553 Glutaminyl-tRNA synthetase
blastp_pdb 1qtq_A 204 706 + 503 Gaps:27 94.03 553 36.35 3e-89 mol:protein length:553 PROTEIN (GLUTAMINYL-TRNA SYNTHETASE)
blastp_pdb 1gts_A 204 706 + 503 Gaps:27 94.03 553 36.35 3e-89 mol:protein length:553 PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.
blastp_pdb 1gtr_A 204 706 + 503 Gaps:27 94.03 553 36.35 3e-89 mol:protein length:553 GLUTAMINYL-tRNA SYNTHETASE
blastp_uniprot_sprot sp|O13775|SYEC_SCHPO 72 715 + 644 Gaps:21 87.85 716 49.76 0.0 Probable glutamate--tRNA ligase cytoplasmic OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC17A5.15c PE 1 SV 1
blastp_uniprot_sprot sp|P46655|SYEC_YEAST 82 715 + 634 Gaps:28 88.42 708 49.52 0.0 Glutamate--tRNA ligase cytoplasmic OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN GUS1 PE 1 SV 3
blastp_uniprot_sprot sp|Q8CGC7|SYEP_MOUSE 8 717 + 710 Gaps:25 46.49 1512 43.24 0.0 Bifunctional glutamate/proline--tRNA ligase OS Mus musculus GN Eprs PE 1 SV 4
blastp_uniprot_sprot sp|P07814|SYEP_HUMAN 5 715 + 711 Gaps:25 46.69 1512 43.06 0.0 Bifunctional glutamate/proline--tRNA ligase OS Homo sapiens GN EPRS PE 1 SV 5
blastp_uniprot_sprot sp|P28668|SYEP_DROME 16 717 + 702 Gaps:26 41.07 1714 43.75 0.0 Bifunctional glutamate/proline--tRNA ligase OS Drosophila melanogaster GN Aats-glupro PE 1 SV 2
blastp_uniprot_sprot sp|Q54KB8|SYEC_DICDI 11 714 + 704 Gaps:20 93.19 764 41.57 0.0 Probable glutamate--tRNA ligase cytoplasmic OS Dictyostelium discoideum GN gluS PE 2 SV 1
blastp_uniprot_sprot sp|Q8SSE4|SYEC_ENCCU 168 696 + 529 Gaps:16 80.22 642 43.50 1e-137 Probable glutamate--tRNA ligase cytoplasmic OS Encephalitozoon cuniculi (strain GB-M1) GN ECU02_1210 PE 3 SV 1
blastp_uniprot_sprot sp|C4VBI7|SYEC_NOSCE 216 717 + 502 Gaps:24 78.50 614 42.53 5e-116 Probable glutamate--tRNA ligase cytoplasmic OS Nosema ceranae (strain BRL01) GN NCER_102160 PE 3 SV 1
blastp_uniprot_sprot sp|A9CSZ1|SYEC_ENTBH 211 717 + 507 Gaps:20 78.45 631 40.61 5e-111 Probable glutamate--tRNA ligase cytoplasmic OS Enterocytozoon bieneusi (strain H348) GN EBI_22577 PE 3 SV 1
blastp_uniprot_sprot sp|A4W846|SYQ_ENT38 194 704 + 511 Gaps:28 95.32 555 36.11 8e-90 Glutamine--tRNA ligase OS Enterobacter sp. (strain 638) GN glnS PE 3 SV 1

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 519 716 198 SSF50715 "Reactome:REACT_71" none IPR011035
Pfam 212 516 305 PF00749 "Reactome:REACT_71" tRNA synthetases class I (E and Q), catalytic domain IPR020058
Pfam 77 158 82 PF14497 none Glutathione S-transferase, C-terminal domain IPR004046
Gene3D 532 627 96 G3DSA:2.40.240.10 "Reactome:REACT_71" none IPR020056
Gene3D 442 517 76 G3DSA:1.10.1160.10 "KEGG:00860+6.1.1.17","KEGG:00970+6.1.1.17","MetaCyc:PWY-5188","Reactome:REACT_71" none IPR020061
Gene3D 212 281 70 G3DSA:3.40.50.620 none none IPR014729
Gene3D 392 441 50 G3DSA:3.40.50.620 none none IPR014729
SUPERFAMILY 212 525 314 SSF52374 none none none
Pfam 519 696 178 PF03950 "Reactome:REACT_71" tRNA synthetases class I (E and Q), anti-codon binding domain IPR020059
ProSitePatterns 219 230 12 PS00178 "Reactome:REACT_71" Aminoacyl-transfer RNA synthetases class-I signature. IPR001412
Gene3D 628 715 88 G3DSA:2.40.240.10 "Reactome:REACT_71" none IPR020056
Gene3D 100 160 61 G3DSA:1.20.1050.10 none none IPR010987
PANTHER 45 717 673 PTHR10119 "Reactome:REACT_71";signature_desc=GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE none IPR000924
PRINTS 390 400 11 PR00987 "Reactome:REACT_71" Glutamyl-tRNA synthetase signature IPR000924
PRINTS 230 241 12 PR00987 "Reactome:REACT_71" Glutamyl-tRNA synthetase signature IPR000924
PRINTS 245 258 14 PR00987 "Reactome:REACT_71" Glutamyl-tRNA synthetase signature IPR000924
PRINTS 216 228 13 PR00987 "Reactome:REACT_71" Glutamyl-tRNA synthetase signature IPR000924
PRINTS 406 414 9 PR00987 "Reactome:REACT_71" Glutamyl-tRNA synthetase signature IPR000924
PANTHER 45 717 673 PTHR10119:SF15 none none none
SUPERFAMILY 58 159 102 SSF47616 none none IPR010987
Gene3D 285 389 105 G3DSA:3.90.800.10 none none none
TIGRFAM 185 697 513 TIGR00463 "KEGG:00860+6.1.1.17","KEGG:00970+6.1.1.17","MetaCyc:PWY-5188" gltX_arch: glutamate--tRNA ligase IPR004526

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1

0 Targeting