Protein : Qrob_P0289950.2 Q. robur

Protein Identifier  ? Qrob_P0289950.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K00026 - malate dehydrogenase [EC:1.1.1.37] Code Enzyme  EC:1.1.1.37
Gene Prediction Quality  validated Protein length 

Sequence

Length: 356  
Kegg Orthology  K00026

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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO:0006108 malate metabolic process The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle.
GO:0030060 L-malate dehydrogenase activity Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+.
GO:0016615 malate dehydrogenase activity Catalysis of the reversible conversion of pyruvate or oxaloacetate to malate.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100232924 1 355 + 355 Gaps:1 100.00 356 92.13 0.0 MDHG NAD-malate dehydrogenase
blastp_kegg lcl|cit:102622394 1 355 + 355 Gaps:1 100.00 356 91.57 0.0 malate dehydrogenase glyoxysomal-like
blastp_kegg lcl|tcc:TCM_006355 1 355 + 355 Gaps:1 91.99 387 91.01 0.0 Malate dehydrogenase isoform 1
blastp_kegg lcl|pper:PRUPE_ppa007769mg 1 355 + 355 Gaps:1 100.00 356 91.01 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1381350 1 355 + 355 Gaps:1 100.00 356 88.76 0.0 malate dehydrogenase putative (EC:1.1.1.37)
blastp_kegg lcl|pmum:103334965 1 355 + 355 Gaps:1 100.00 356 89.61 0.0 malate dehydrogenase glyoxysomal
blastp_kegg lcl|fve:101310653 1 355 + 355 Gaps:2 100.00 357 88.80 0.0 malate dehydrogenase glyoxysomal-like
blastp_kegg lcl|pxb:103967049 1 355 + 355 Gaps:1 100.00 356 89.33 0.0 malate dehydrogenase glyoxysomal
blastp_kegg lcl|pxb:103967046 1 355 + 355 Gaps:1 100.00 356 89.33 0.0 malate dehydrogenase glyoxysomal
blastp_kegg lcl|mdm:103436249 1 355 + 355 Gaps:1 100.00 356 88.76 0.0 malate dehydrogenase glyoxysomal
blastp_pdb 1sev_B 1 353 + 353 Gaps:1 97.79 362 88.42 0.0 mol:protein length:362 Malate dehydrogenase glyoxysomal precursor
blastp_pdb 1sev_A 1 353 + 353 Gaps:1 97.79 362 88.42 0.0 mol:protein length:362 Malate dehydrogenase glyoxysomal precursor
blastp_pdb 1smk_H 36 353 + 318 none 97.55 326 91.19 0.0 mol:protein length:326 Malate dehydrogenase glyoxysomal
blastp_pdb 1smk_G 36 353 + 318 none 97.55 326 91.19 0.0 mol:protein length:326 Malate dehydrogenase glyoxysomal
blastp_pdb 1smk_F 36 353 + 318 none 97.55 326 91.19 0.0 mol:protein length:326 Malate dehydrogenase glyoxysomal
blastp_pdb 1smk_E 36 353 + 318 none 97.55 326 91.19 0.0 mol:protein length:326 Malate dehydrogenase glyoxysomal
blastp_pdb 1smk_D 36 353 + 318 none 97.55 326 91.19 0.0 mol:protein length:326 Malate dehydrogenase glyoxysomal
blastp_pdb 1smk_C 36 353 + 318 none 97.55 326 91.19 0.0 mol:protein length:326 Malate dehydrogenase glyoxysomal
blastp_pdb 1smk_B 36 353 + 318 none 97.55 326 91.19 0.0 mol:protein length:326 Malate dehydrogenase glyoxysomal
blastp_pdb 1smk_A 36 353 + 318 none 97.55 326 91.19 0.0 mol:protein length:326 Malate dehydrogenase glyoxysomal
blastp_uniprot_sprot sp|P19446|MDHG_CITLA 1 353 + 353 Gaps:1 99.44 356 88.42 0.0 Malate dehydrogenase glyoxysomal OS Citrullus lanatus PE 1 SV 1
blastp_uniprot_sprot sp|P46488|MDHG_CUCSA 1 353 + 353 Gaps:1 99.44 356 88.14 0.0 Malate dehydrogenase glyoxysomal OS Cucumis sativus GN MDHG PE 2 SV 1
blastp_uniprot_sprot sp|Q42972|MDHG_ORYSJ 10 355 + 346 none 97.19 356 86.13 0.0 Malate dehydrogenase glyoxysomal OS Oryza sativa subsp. japonica GN Os12g0632700 PE 1 SV 3
blastp_uniprot_sprot sp|O82399|MDHG2_ARATH 8 355 + 348 Gaps:2 98.87 354 83.14 0.0 Probable malate dehydrogenase glyoxysomal OS Arabidopsis thaliana GN At2g22780 PE 2 SV 1
blastp_uniprot_sprot sp|P37228|MDHG_SOYBN 1 355 + 355 Gaps:4 100.00 353 83.00 0.0 Malate dehydrogenase glyoxysomal OS Glycine max PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZP05|MDHG1_ARATH 1 355 + 355 Gaps:5 100.00 354 85.59 0.0 Malate dehydrogenase glyoxysomal OS Arabidopsis thaliana GN At5g09660 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XFW3|MDHG2_BRANA 1 355 + 355 Gaps:3 100.00 358 84.36 0.0 Malate dehydrogenase 2 glyoxysomal OS Brassica napus GN MDH2 PE 3 SV 1
blastp_uniprot_sprot sp|Q43743|MDHG1_BRANA 9 355 + 347 Gaps:2 97.49 358 85.10 0.0 Malate dehydrogenase 1 glyoxysomal OS Brassica napus GN MDH1 PE 2 SV 2
blastp_uniprot_sprot sp|P17783|MDHM_CITLA 42 352 + 311 none 89.63 347 67.52 3e-146 Malate dehydrogenase mitochondrial OS Citrullus lanatus GN MMDH PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZP06|MDHM1_ARATH 37 352 + 316 none 92.67 341 65.82 5e-146 Malate dehydrogenase 1 mitochondrial OS Arabidopsis thaliana GN At1g53240 PE 1 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 15 355 341 PTHR11540 none none IPR001557
Pfam 189 353 165 PF02866 none lactate/malate dehydrogenase, alpha/beta C-terminal domain IPR022383
SUPERFAMILY 188 353 166 SSF56327 none none IPR015955
SUPERFAMILY 44 187 144 SSF51735 none none none
PANTHER 15 355 341 PTHR11540:SF9 none none none
Gene3D 45 188 144 G3DSA:3.40.50.720 none none IPR016040
ProSitePatterns 188 200 13 PS00068 "KEGG:00020+1.1.1.37","KEGG:00270+1.1.1.37","KEGG:00620+1.1.1.37","KEGG:00630+1.1.1.37","KEGG:00680+1.1.1.37","KEGG:00710+1.1.1.37","KEGG:00720+1.1.1.37","MetaCyc:PWY-1622","MetaCyc:PWY-5392","MetaCyc:PWY-561","MetaCyc:PWY-5690","MetaCyc:PWY-5913","MetaCyc:PWY-6728","MetaCyc:PWY-6969","MetaCyc:PWY-7115","MetaCyc:PWY-7383","Reactome:REACT_474" Malate dehydrogenase active site signature. IPR001252
Gene3D 189 353 165 G3DSA:3.90.110.10 none none IPR015955
Pfam 45 187 143 PF00056 none lactate/malate dehydrogenase, NAD binding domain IPR001236
TIGRFAM 45 354 310 TIGR01772 "KEGG:00020+1.1.1.37","KEGG:00270+1.1.1.37","KEGG:00620+1.1.1.37","KEGG:00630+1.1.1.37","KEGG:00680+1.1.1.37","KEGG:00710+1.1.1.37","KEGG:00720+1.1.1.37","MetaCyc:PWY-1622","MetaCyc:PWY-5392","MetaCyc:PWY-561","MetaCyc:PWY-5690","MetaCyc:PWY-5913","MetaCyc:PWY-6728","MetaCyc:PWY-6969","MetaCyc:PWY-7115","MetaCyc:PWY-7383" MDH_euk_gproteo: malate dehydrogenase, NAD-dependent IPR010097
PIRSF 43 351 309 PIRSF000102 none none IPR001557

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5

0 Targeting