Protein : Qrob_P0278790.2 Q. robur
Protein Identifier  ? Qrob_P0278790.2 Organism . Name  Quercus robur
Score  98.1 Score Type  egn
Protein Description  (M=1) K17471 - sulfate transporter 3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 650  
Kegg Orthology  K17471
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0008271 secondary active sulfate transmembrane transporter activity Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport.
GO:0008272 sulfate transport The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0015116 sulfate transmembrane transporter activity Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other.
GO:0009507 chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103324001 1 649 + 649 none 100.00 649 83.67 0.0 sulfate transporter 3.1-like
blastp_kegg lcl|pper:PRUPE_ppa002648mg 1 649 + 649 none 100.00 649 83.36 0.0 hypothetical protein
blastp_kegg lcl|pxb:103961149 1 649 + 649 none 100.00 649 83.36 0.0 sulfate transporter 3.1-like
blastp_kegg lcl|mdm:103453228 1 649 + 649 none 100.00 649 82.90 0.0 sulfate transporter 3.1-like
blastp_kegg lcl|pxb:103928011 1 649 + 649 none 100.00 649 82.43 0.0 sulfate transporter 3.1-like
blastp_kegg lcl|mdm:103453153 1 649 + 649 none 100.00 649 82.28 0.0 sulfate transporter 3.1-like
blastp_kegg lcl|pop:POPTR_0010s09280g 1 648 + 648 Gaps:5 100.00 653 82.70 0.0 POPTRDRAFT_804996 hypothetical protein
blastp_kegg lcl|tcc:TCM_020684 3 649 + 647 none 99.54 650 82.69 0.0 Sulfate transporter putative isoform 1
blastp_kegg lcl|cic:CICLE_v10004520mg 1 649 + 649 Gaps:1 100.00 648 81.94 0.0 hypothetical protein
blastp_kegg lcl|cit:102622416 1 649 + 649 Gaps:1 100.00 648 82.10 0.0 sulfate transporter 3.1-like
blastp_pdb 3llo_A 484 623 + 140 Gaps:8 93.71 143 29.85 2e-13 mol:protein length:143 Prestin
blastp_pdb 2kln_A 501 625 + 125 Gaps:8 90.00 130 25.64 2e-09 mol:protein length:130 PROBABLE SULPHATE-TRANSPORT TRANSMEMBRANE PRO
blastp_uniprot_sprot sp|Q9SV13|SUT31_ARATH 1 639 + 639 Gaps:11 98.78 658 73.08 0.0 Sulfate transporter 3.1 OS Arabidopsis thaliana GN SULTR3 1 PE 2 SV 1
blastp_uniprot_sprot sp|O04289|SUT32_ARATH 10 643 + 634 Gaps:1 98.30 646 67.40 0.0 Sulfate transporter 3.2 OS Arabidopsis thaliana GN SULTR3 2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LW86|SUT34_ARATH 10 624 + 615 none 94.18 653 55.77 0.0 Probable sulfate transporter 3.4 OS Arabidopsis thaliana GN SULTR3 4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SXS2|SUT33_ARATH 10 628 + 619 Gaps:1 98.26 631 56.45 0.0 Probable sulfate transporter 3.3 OS Arabidopsis thaliana GN SULTR3 3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SAY1|SUT11_ARATH 10 627 + 618 Gaps:1 95.38 649 54.44 0.0 Sulfate transporter 1.1 OS Arabidopsis thaliana GN SULTR1 1 PE 1 SV 2
blastp_uniprot_sprot sp|P53392|SUT2_STYHA 10 624 + 615 Gaps:2 92.90 662 53.33 0.0 High affinity sulfate transporter 2 OS Stylosanthes hamata GN ST2 PE 2 SV 1
blastp_uniprot_sprot sp|P53391|SUT1_STYHA 10 624 + 615 Gaps:4 92.50 667 53.00 0.0 High affinity sulfate transporter 1 OS Stylosanthes hamata GN ST1 PE 2 SV 1
blastp_uniprot_sprot sp|Q94LW6|SUT35_ARATH 25 636 + 612 Gaps:14 95.27 634 54.80 0.0 Probable sulfate transporter 3.5 OS Arabidopsis thaliana GN SULTR3 5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MAX3|SUT12_ARATH 10 626 + 617 Gaps:1 94.64 653 54.21 0.0 Sulfate transporter 1.2 OS Arabidopsis thaliana GN SULTR1 2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FEP7|SUT13_ARATH 10 627 + 618 Gaps:1 94.36 656 52.50 0.0 Sulfate transporter 1.3 OS Arabidopsis thaliana GN SULTR1 3 PE 2 SV 1
rpsblast_cdd gnl|CDD|162054 59 622 + 564 Gaps:7 100.00 563 44.58 1e-162 TIGR00815 sulP high affinity sulphate transporter 1. The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria fungi plants and animals. Many organisms including Bacillus subtilis Synechocystis sp Saccharomyces cerevisiae Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized and all are sulfate uptake transporters. Some transport their substrate with high affinities while others transport it with relatively low affinities. Most function by SO42- :H+symport but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis a second bears two proteins one from M. tuberculosis the other from Synechocystis sp and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
rpsblast_cdd gnl|CDD|144493 171 449 + 279 Gaps:2 100.00 279 45.16 2e-86 pfam00916 Sulfate_transp Sulfate transporter family. Mutations in human SLC26A2 lead to several human diseases.
rpsblast_cdd gnl|CDD|31004 54 626 + 573 Gaps:34 98.38 554 29.54 1e-83 COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|205965 58 140 + 83 none 100.00 83 55.42 2e-30 pfam13792 Sulfate_tra_GLY Sulfate transporter N-terminal domain with GLY motif. This domain is found usually at the N-terminus of sulfate-transporter proteins. It carries a highly conserved GLY sequence motif but the function of the domain is not known.
rpsblast_cdd gnl|CDD|183265 48 631 + 584 Gaps:100 99.65 568 25.44 6e-28 PRK11660 PRK11660 putative transporter Provisional.
rpsblast_cdd gnl|CDD|132913 504 619 + 116 Gaps:9 100.00 107 36.45 4e-22 cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters plays a role in the function and regulation of the transport activity proposed general NTP binding function. The SulP family is a large and diverse family of anion transporters with members from eubacteria plants fungi and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
rpsblast_cdd gnl|CDD|201948 504 622 + 119 Gaps:13 100.00 106 43.40 6e-22 pfam01740 STAS STAS domain. The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
rpsblast_kog gnl|CDD|35457 10 641 + 632 Gaps:20 96.84 665 36.02 1e-158 KOG0236 KOG0236 KOG0236 Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism].

33 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 503 626 124 PS50801 none STAS domain profile. IPR002645
Phobius 124 140 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 445 475 31 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 251 261 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 283 353 71 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
TIGRFAM 59 622 564 TIGR00815 "Reactome:REACT_15518" sulP: sulfate permease IPR001902
Pfam 171 449 279 PF00916 none Sulfate transporter family IPR011547
Phobius 413 433 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 214 232 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 118 123 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 354 373 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 434 444 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 94 98 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 504 622 119 PF01740 none STAS domain IPR002645
Phobius 186 213 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 374 384 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 152 174 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 233 250 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 75 75 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 476 649 174 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 175 185 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 141 151 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 509 626 118 G3DSA:3.30.750.24 none none IPR002645
PANTHER 10 636 627 PTHR11814 "Reactome:REACT_15518";signature_desc=SULFATE TRANSPORTER none IPR001902
PANTHER 10 636 627 PTHR11814:SF60 none none IPR030311
Phobius 99 117 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 76 93 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 385 407 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 262 282 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 58 139 82 PF13792 none Sulfate transporter N-terminal domain with GLY motif IPR030402

10 Localization

Analysis Start End Length
TMHMM 354 376 22
TMHMM 261 283 22
TMHMM 232 254 22
TMHMM 319 341 22
TMHMM 416 438 22
TMHMM 389 411 22
TMHMM 156 178 22
TMHMM 453 475 22
TMHMM 124 141 17
TMHMM 190 212 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting