Protein : Qrob_P0276120.2 Q. robur
Protein Identifier  ? Qrob_P0276120.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) 3.6.3.3 - Cadmium-exporting ATPase. Code Enzyme  EC:3.6.3.5, EC:3.6.3.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 580  
Kegg Orthology  K01534
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0019829 cation-transporting ATPase activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102625788 1 514 + 514 Gaps:82 66.33 802 66.54 0.0 cadmium/zinc-transporting ATPase HMA2-like
blastp_kegg lcl|cic:CICLE_v10003938mg 1 514 + 514 Gaps:84 85.44 625 66.10 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10000354mg 1 503 + 503 Gaps:82 67.31 774 66.99 0.0 hypothetical protein
blastp_kegg lcl|gmx:100815324 1 513 + 513 Gaps:84 60.00 885 64.22 0.0 GmHMA1a GmHMA1b cadmium/zinc-transporting ATPase 3-like
blastp_kegg lcl|tcc:TCM_039368 2 507 + 506 Gaps:81 49.43 1058 65.58 0.0 Cadmium/zinc-transporting ATPase 3 isoform 1
blastp_kegg lcl|pop:POPTR_0006s07650g 2 511 + 510 Gaps:86 61.08 871 62.78 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_009G240000g 4 512 + 509 Gaps:85 74.19 709 63.31 0.0 hypothetical protein
blastp_kegg lcl|vvi:100243678 2 507 + 506 Gaps:81 59.91 873 63.86 0.0 cadmium/zinc-transporting ATPase 3-like
blastp_kegg lcl|eus:EUTSA_v10024341mg 2 497 + 496 Gaps:82 55.39 928 61.67 0.0 hypothetical protein
blastp_kegg lcl|cam:101492022 1 512 + 512 Gaps:87 63.67 834 62.15 0.0 cadmium/zinc-transporting ATPase HMA2-like
blastp_pdb 3j08_B 4 503 + 500 Gaps:110 80.62 645 32.31 1e-56 mol:protein length:645 copper-exporting P-type ATPase A
blastp_pdb 3j08_A 4 503 + 500 Gaps:110 80.62 645 32.31 1e-56 mol:protein length:645 copper-exporting P-type ATPase A
blastp_pdb 3j09_B 4 503 + 500 Gaps:110 71.92 723 32.31 3e-56 mol:protein length:723 copper-exporting P-type ATPase A
blastp_pdb 3j09_A 4 503 + 500 Gaps:110 71.92 723 32.31 3e-56 mol:protein length:723 copper-exporting P-type ATPase A
blastp_pdb 3rfu_D 2 471 + 470 Gaps:102 66.58 736 31.02 4e-47 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_C 2 471 + 470 Gaps:102 66.58 736 31.02 4e-47 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_B 2 471 + 470 Gaps:102 66.58 736 31.02 4e-47 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_A 2 471 + 470 Gaps:102 66.58 736 31.02 4e-47 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3a1d_B 138 447 + 310 Gaps:53 95.82 287 39.64 7e-39 mol:protein length:287 Probable copper-exporting P-type ATPase A
blastp_pdb 3a1d_A 138 447 + 310 Gaps:53 95.82 287 39.64 7e-39 mol:protein length:287 Probable copper-exporting P-type ATPase A
blastp_uniprot_sprot sp|Q9SZW4|HMA2_ARATH 2 499 + 498 Gaps:83 54.36 951 61.32 0.0 Cadmium/zinc-transporting ATPase HMA2 OS Arabidopsis thaliana GN HMA2 PE 2 SV 1
blastp_uniprot_sprot sp|O64474|HMA4_ARATH 2 500 + 499 Gaps:82 44.11 1172 59.57 0.0 Putative cadmium/zinc-transporting ATPase HMA4 OS Arabidopsis thaliana GN HMA4 PE 1 SV 2
blastp_uniprot_sprot sp|P0CW78|HMA3B_ARATH 4 496 + 493 Gaps:84 67.50 760 56.53 0.0 Cadmium/zinc-transporting ATPase HMA3 OS Arabidopsis thaliana GN HMA3 PE 1 SV 1
blastp_uniprot_sprot sp|P0CW77|HMA3A_ARATH 4 303 + 300 Gaps:52 64.94 542 53.41 6e-116 Putative inactive cadmium/zinc-transporting ATPase HMA3 OS Arabidopsis thaliana GN HMA3 PE 5 SV 1
blastp_uniprot_sprot sp|Q6GIX1|CADA_STAAR 3 495 + 493 Gaps:93 71.35 726 32.82 4e-79 Probable cadmium-transporting ATPase OS Staphylococcus aureus (strain MRSA252) GN cadA PE 3 SV 1
blastp_uniprot_sprot sp|P37386|CADA2_STAAU 3 495 + 493 Gaps:93 64.43 804 32.63 6e-77 Probable cadmium-transporting ATPase OS Staphylococcus aureus GN cadA PE 3 SV 1
blastp_uniprot_sprot sp|P20021|CADA1_STAAU 3 495 + 493 Gaps:93 71.25 727 32.43 1e-75 Probable cadmium-transporting ATPase OS Staphylococcus aureus GN cadA PE 3 SV 1
blastp_uniprot_sprot sp|Q60048|CADA_LISMN 3 495 + 493 Gaps:97 73.14 711 32.50 3e-73 Probable cadmium-transporting ATPase OS Listeria monocytogenes GN cadA PE 1 SV 1
blastp_uniprot_sprot sp|P30336|CADA_BACPE 3 495 + 493 Gaps:95 71.65 723 31.27 7e-73 Probable cadmium-transporting ATPase OS Bacillus pseudofirmus (strain OF4) GN cadA PE 3 SV 2
blastp_uniprot_sprot sp|P58414|CADA_LISMO 3 495 + 493 Gaps:91 72.98 707 30.81 4e-68 Probable cadmium-transporting ATPase OS Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN cadA PE 3 SV 1

31 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 160 180 21 SSF56784 none none IPR023214
SUPERFAMILY 222 491 270 SSF56784 none none IPR023214
Phobius 1 75 75 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 137 446 310 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 22 91 70 SSF81653 none none none
PANTHER 1 498 498 PTHR24093:SF126 none none IPR027265
PANTHER 1 498 498 PTHR24093 none none none
Pfam 158 404 247 PF00702 none haloacid dehalogenase-like hydrolase IPR023214
Phobius 472 494 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 164 170 7 PS00154 none E1-E2 ATPases phosphorylation site. IPR018303
TIGRFAM 85 326 242 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
TIGRFAM 365 473 109 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
ProSitePatterns 390 412 23 PS01229 none Hypothetical cof family signature 2. none
Phobius 467 471 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 153 181 29 G3DSA:3.40.1110.10 none none IPR023299
Phobius 447 466 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 3 95 93 PF00122 none E1-E2 ATPase IPR008250
PRINTS 422 447 26 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
PRINTS 390 406 17 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
PRINTS 363 379 17 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
Phobius 97 107 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 284 438 155 G3DSA:3.40.50.1000 none none IPR023214
Phobius 495 579 85 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 108 136 29 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 76 96 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 4 93 90 G3DSA:2.70.150.10 none none IPR008250
PRINTS 304 314 11 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 57 71 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 390 409 20 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 414 426 13 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757

4 Localization

Analysis Start End Length
TMHMM 111 133 22
TMHMM 74 96 22
TMHMM 447 466 19
TMHMM 471 493 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

0 Targeting