Protein : Qrob_P0262720.2 Q. robur
Protein Identifier  ? Qrob_P0262720.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=27) 1.3.3.8 - Tetrahydroberberine oxidase. Code Enzyme  EC:1.3.3.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 537  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity Catalysis of the reaction: UDP-N-acetylmuramate + NADP+ = UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + NADPH + H+.
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa019761mg 8 532 + 525 Gaps:4 99.24 525 69.29 0.0 hypothetical protein
blastp_kegg lcl|pxb:103952422 6 532 + 527 Gaps:5 98.49 530 67.82 0.0 reticuline oxidase-like protein
blastp_kegg lcl|fve:101309917 1 532 + 532 Gaps:5 98.87 533 65.65 0.0 reticuline oxidase-like protein-like
blastp_kegg lcl|pxb:103952423 1 532 + 532 Gaps:8 100.00 528 66.10 0.0 reticuline oxidase-like protein
blastp_kegg lcl|pop:POPTR_0011s15940g 1 530 + 530 Gaps:3 99.25 531 63.57 0.0 POPTRDRAFT_233054 FAD-binding domain-containing family protein
blastp_kegg lcl|pxb:103952424 1 532 + 532 Gaps:9 100.00 539 62.89 0.0 reticuline oxidase-like protein
blastp_kegg lcl|pmum:103325294 23 530 + 508 Gaps:4 96.18 524 66.47 0.0 reticuline oxidase-like protein
blastp_kegg lcl|pmum:103326620 1 532 + 532 Gaps:4 100.00 530 62.08 0.0 reticuline oxidase-like protein
blastp_kegg lcl|pop:POPTR_0001s46340g 30 530 + 501 Gaps:3 94.68 526 65.06 0.0 POPTRDRAFT_847350 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa018446mg 29 532 + 504 Gaps:7 96.88 513 67.20 0.0 hypothetical protein
blastp_pdb 3d2j_A 12 535 + 524 Gaps:24 95.17 538 39.06 1e-105 mol:protein length:538 berberine bridge-forming enzyme
blastp_pdb 3d2h_A 12 535 + 524 Gaps:24 95.17 538 39.06 1e-105 mol:protein length:538 berberine bridge-forming enzyme
blastp_pdb 3d2d_A 12 535 + 524 Gaps:24 95.17 538 39.06 1e-105 mol:protein length:538 berberine bridge-forming enzyme
blastp_pdb 3gsy_A 30 535 + 506 Gaps:20 95.95 519 39.56 1e-104 mol:protein length:519 Reticuline oxidase Berberine bridge-forming
blastp_pdb 3fw9_A 31 532 + 502 Gaps:20 99.80 495 39.88 2e-104 mol:protein length:495 Reticuline oxidase
blastp_pdb 3fwa_A 31 535 + 505 Gaps:20 100.00 497 39.44 2e-103 mol:protein length:497 Reticuline oxidase
blastp_pdb 3fw7_A 30 532 + 503 Gaps:20 99.40 498 39.60 2e-103 mol:protein length:498 Reticuline oxidase
blastp_pdb 3fw8_A 31 532 + 502 Gaps:20 99.80 495 39.68 5e-103 mol:protein length:495 Reticuline oxidase
blastp_pdb 3rja_A 79 529 + 451 Gaps:48 91.54 473 26.56 2e-23 mol:protein length:473 Carbohydrate oxidase
blastp_pdb 3rj8_A 79 529 + 451 Gaps:48 91.54 473 26.56 2e-23 mol:protein length:473 Carbohydrate oxidase
blastp_uniprot_sprot sp|Q9SVG4|RETOL_ARATH 30 536 + 507 Gaps:9 88.42 570 48.02 2e-151 Reticuline oxidase-like protein OS Arabidopsis thaliana GN At4g20830 PE 1 SV 2
blastp_uniprot_sprot sp|Q33DQ2|THCAI_CANSA 10 535 + 526 Gaps:20 97.25 545 45.28 3e-147 Inactive tetrahydrocannabinolic acid synthase OS Cannabis sativa PE 3 SV 1
blastp_uniprot_sprot sp|A6P6V9|CBDAS_CANSA 22 536 + 515 Gaps:13 95.22 544 45.95 3e-146 Cannabidiolic acid synthase OS Cannabis sativa GN CBDAS PE 1 SV 1
blastp_uniprot_sprot sp|Q8GTB6|THCAS_CANSA 10 535 + 526 Gaps:22 97.25 545 45.28 6e-144 Tetrahydrocannabinolic acid synthase OS Cannabis sativa PE 1 SV 1
blastp_uniprot_sprot sp|A6P6W0|CASL1_CANSA 10 533 + 524 Gaps:12 96.88 545 43.56 4e-141 Cannabidiolic acid synthase-like 1 OS Cannabis sativa GN CBDAS2 PE 2 SV 1
blastp_uniprot_sprot sp|A6P6W1|CASL2_CANSA 10 533 + 524 Gaps:12 96.88 545 43.75 6e-141 Cannabidiolic acid synthase-like 2 OS Cannabis sativa GN CBDAS3 PE 2 SV 1
blastp_uniprot_sprot sp|P93479|RETO_PAPSO 3 536 + 534 Gaps:20 98.32 535 38.97 7e-109 Reticuline oxidase OS Papaver somniferum GN BBE1 PE 3 SV 1
blastp_uniprot_sprot sp|P30986|RETO_ESCCA 12 535 + 524 Gaps:24 95.17 538 39.06 2e-104 Reticuline oxidase OS Eschscholzia californica GN BBE1 PE 1 SV 1
blastp_uniprot_sprot sp|P08159|HDNO_ARTOX 37 250 + 214 Gaps:17 44.32 458 33.99 4e-16 6-hydroxy-D-nicotine oxidase OS Arthrobacter oxydans PE 1 SV 2
blastp_uniprot_sprot sp|O06997|YVDP_BACSU 79 530 + 452 Gaps:64 92.17 447 29.61 4e-14 Uncharacterized FAD-linked oxidoreductase YvdP OS Bacillus subtilis (strain 168) GN yvdP PE 1 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 20 24 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 8 19 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSiteProfiles 75 249 175 PS51387 none PCMH-type FAD-binding domain profile. IPR016166
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 473 530 58 PF08031 none Berberine and berberine like IPR012951
Phobius 25 536 512 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 22 250 229 SSF56176 none none IPR016166
Gene3D 136 250 115 G3DSA:3.30.465.10 none none IPR016169
Pfam 79 216 138 PF01565 "KEGG:00520+1.3.1.98","KEGG:00550+1.3.1.98","MetaCyc:PWY-6386","MetaCyc:PWY-6387","UniPathway:UPA00219" FAD binding domain IPR006094
PANTHER 1 536 536 PTHR32448 none none none
Gene3D 76 135 60 G3DSA:3.30.43.10 none none IPR016167

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 24 23
SignalP_EUK 1 24 23
TMHMM 7 26 19

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 24   Secretory pathway 1 0.968 0.026 NON-PLANT 24