Protein : Qrob_P0257140.2 Q. robur
Protein Identifier  ? Qrob_P0257140.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=8) K11253 - histone H3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 137  
Kegg Orthology  K11253
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0000786 nucleosome A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
GO:0046982 protein heterodimerization activity Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|crb:CARUB_v10021660mg 1 136 + 136 none 80.47 169 100.00 2e-92 hypothetical protein
blastp_kegg lcl|atr:s00030p00044250 1 136 + 136 none 100.00 136 100.00 9e-92 AMTR_s00030p00044250 hypothetical protein
blastp_kegg lcl|atr:s00009p00240080 1 136 + 136 none 100.00 136 100.00 9e-92 AMTR_s00009p00240080 hypothetical protein
blastp_kegg lcl|mus:104000303 1 136 + 136 none 100.00 136 100.00 9e-92 histone H3.2
blastp_kegg lcl|mus:103993559 1 136 + 136 none 100.00 136 100.00 9e-92 histone H3.2
blastp_kegg lcl|mus:103988514 1 136 + 136 none 100.00 136 100.00 9e-92 histone H3.2
blastp_kegg lcl|mus:103988107 1 136 + 136 none 100.00 136 100.00 9e-92 histone H3.2
blastp_kegg lcl|mus:103983656 1 136 + 136 none 100.00 136 100.00 9e-92 histone H3.2
blastp_kegg lcl|mus:103979097 1 136 + 136 none 100.00 136 100.00 9e-92 histone H3.2
blastp_kegg lcl|mus:103998569 1 136 + 136 none 100.00 136 100.00 9e-92 histone H3.2
blastp_pdb 2hio_C 1 136 + 136 none 100.00 136 97.06 6e-92 mol:protein length:136 PROTEIN (HISTONE H3)
blastp_pdb 2f8n_E 1 136 + 136 none 100.00 136 97.06 6e-92 mol:protein length:136 Histone H3.1
blastp_pdb 2f8n_A 1 136 + 136 none 100.00 136 97.06 6e-92 mol:protein length:136 Histone H3.1
blastp_pdb 2aro_G 1 136 + 136 none 100.00 136 97.06 6e-92 mol:protein length:136 HISTONE H3
blastp_pdb 2aro_C 1 136 + 136 none 100.00 136 97.06 6e-92 mol:protein length:136 HISTONE H3
blastp_pdb 1tzy_G 1 136 + 136 none 100.00 136 97.06 6e-92 mol:protein length:136 HISTONE H3
blastp_pdb 1tzy_C 1 136 + 136 none 100.00 136 97.06 6e-92 mol:protein length:136 HISTONE H3
blastp_pdb 1hq3_G 1 136 + 136 none 100.00 136 97.06 6e-92 mol:protein length:136 HISTONE H3
blastp_pdb 1hq3_C 1 136 + 136 none 100.00 136 97.06 6e-92 mol:protein length:136 HISTONE H3
blastp_pdb 1eqz_G 1 136 + 136 none 100.00 136 97.06 6e-92 mol:protein length:136 PROTEIN (HISTONE H3)
blastp_uniprot_sprot sp|Q76MV0|H32_TOBAC 1 136 + 136 none 100.00 136 100.00 3e-93 Histone H3.2 OS Nicotiana tabacum GN B34 PE 1 SV 1
blastp_uniprot_sprot sp|P69248|H32_PETCR 1 136 + 136 none 100.00 136 100.00 3e-93 Histone H3.2 OS Petroselinum crispum GN H3-7 PE 3 SV 2
blastp_uniprot_sprot sp|Q2RAD9|H32_ORYSJ 1 136 + 136 none 100.00 136 100.00 3e-93 Histone H3.2 OS Oryza sativa subsp. japonica GN Os01g0866200 PE 3 SV 1
blastp_uniprot_sprot sp|A2Y533|H32_ORYSI 1 136 + 136 none 100.00 136 100.00 3e-93 Histone H3.2 OS Oryza sativa subsp. indica GN OsI_019426 PE 2 SV 1
blastp_uniprot_sprot sp|P69246|H32_MAIZE 1 136 + 136 none 100.00 136 100.00 3e-93 Histone H3.2 OS Zea mays GN H3C2 PE 1 SV 2
blastp_uniprot_sprot sp|Q71T45|H32_EUPES 1 136 + 136 none 100.00 136 100.00 3e-93 Histone H3.2 OS Euphorbia esula GN H3 PE 2 SV 3
blastp_uniprot_sprot sp|Q6LCK1|H32_BRANA 1 136 + 136 none 100.00 136 100.00 3e-93 Histone H3.2 OS Brassica napus PE 2 SV 3
blastp_uniprot_sprot sp|Q6LBE3|H32_ASPOF 1 136 + 136 none 100.00 136 100.00 3e-93 Histone H3.2 OS Asparagus officinalis PE 2 SV 3
blastp_uniprot_sprot sp|P59226|H32_ARATH 1 136 + 136 none 100.00 136 100.00 3e-93 Histone H3.2 OS Arabidopsis thaliana GN HTR2 PE 1 SV 2
blastp_uniprot_sprot sp|P68428|H32_WHEAT 1 136 + 136 none 100.00 136 99.26 7e-93 Histone H3.2 OS Triticum aestivum PE 1 SV 2

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 67 75 9 PS00959 none Histone H3 signature 2. IPR000164
Pfam 58 132 75 PF00125 none Core histone H2A/H2B/H3/H4 IPR007125
PANTHER 1 136 136 PTHR11426 none none IPR000164
PRINTS 98 114 17 PR00622 none Histone H3 signature IPR000164
PRINTS 114 135 22 PR00622 none Histone H3 signature IPR000164
PRINTS 3 17 15 PR00622 none Histone H3 signature IPR000164
PRINTS 34 55 22 PR00622 none Histone H3 signature IPR000164
PRINTS 17 31 15 PR00622 none Histone H3 signature IPR000164
PRINTS 80 98 19 PR00622 none Histone H3 signature IPR000164
PRINTS 58 75 18 PR00622 none Histone H3 signature IPR000164
SMART 34 136 103 SM00428 none Histone H3 IPR000164
Gene3D 2 134 133 G3DSA:1.10.20.10 none none IPR009072
SUPERFAMILY 2 133 132 SSF47113 none none IPR009072
ProSitePatterns 15 21 7 PS00322 none Histone H3 signature 1. IPR000164

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting