Protein : Qrob_P0254750.2 Q. robur
Protein Identifier  ? Qrob_P0254750.2 Organism . Name  Quercus robur
Score  96.1 Score Type  egn
Protein Description  (M=14) K00276 - primary-amine oxidase [EC:1.4.3.21] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 698  
Kegg Orthology  K00276
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0005507 copper ion binding Interacting selectively and non-covalently with copper (Cu) ions.
GO:0048038 quinone binding Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
GO:0009308 amine metabolic process The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
GO:0008131 primary amine oxidase activity Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100244323 21 697 + 677 Gaps:29 97.03 674 78.44 0.0 primary amine oxidase-like
blastp_kegg lcl|pmum:103324275 23 697 + 675 Gaps:30 96.71 669 78.52 0.0 primary amine oxidase-like
blastp_kegg lcl|pper:PRUPE_ppa016301mg 23 697 + 675 Gaps:30 96.71 669 77.28 0.0 hypothetical protein
blastp_kegg lcl|fve:101305686 25 694 + 670 Gaps:30 96.12 670 78.11 0.0 primary amine oxidase-like
blastp_kegg lcl|tcc:TCM_020602 1 694 + 694 Gaps:29 77.97 858 72.20 0.0 Copper amine oxidase family protein
blastp_kegg lcl|pxb:103956668 25 697 + 673 Gaps:33 96.45 676 74.54 0.0 primary amine oxidase-like
blastp_kegg lcl|vvi:100259696 21 695 + 675 Gaps:29 97.75 667 74.85 0.0 primary amine oxidase-like
blastp_kegg lcl|mtr:MTR_1g104590 1 694 + 694 Gaps:30 99.56 675 70.24 0.0 Primary amine oxidase
blastp_kegg lcl|gmx:100799555 9 697 + 689 Gaps:30 98.81 675 70.31 0.0 primary amine oxidase-like
blastp_kegg lcl|gmx:100802062 1 696 + 696 Gaps:32 99.85 675 68.69 0.0 primary amine oxidase-like
blastp_pdb 1w2z_D 24 695 + 672 Gaps:27 99.38 649 62.33 0.0 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1w2z_C 24 695 + 672 Gaps:27 99.38 649 62.33 0.0 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1w2z_B 24 695 + 672 Gaps:27 99.38 649 62.33 0.0 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1w2z_A 24 695 + 672 Gaps:27 99.38 649 62.33 0.0 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1ksi_B 26 693 + 668 Gaps:27 99.84 642 62.40 0.0 mol:protein length:642 COPPER AMINE OXIDASE
blastp_pdb 1ksi_A 26 693 + 668 Gaps:27 99.84 642 62.40 0.0 mol:protein length:642 COPPER AMINE OXIDASE
blastp_pdb 2woh_B 27 680 + 654 Gaps:59 86.24 727 35.41 8e-100 mol:protein length:727 PRIMARY AMINE OXIDASE
blastp_pdb 2woh_A 27 680 + 654 Gaps:59 86.24 727 35.41 8e-100 mol:protein length:727 PRIMARY AMINE OXIDASE
blastp_pdb 2wof_B 27 680 + 654 Gaps:59 86.24 727 35.41 8e-100 mol:protein length:727 PRIMARY AMINE OXIDASE
blastp_pdb 2wof_A 27 680 + 654 Gaps:59 86.24 727 35.41 8e-100 mol:protein length:727 PRIMARY AMINE OXIDASE
blastp_uniprot_sprot sp|Q43077|AMO_PEA 1 695 + 695 Gaps:33 100.00 674 61.42 0.0 Primary amine oxidase OS Pisum sativum PE 1 SV 1
blastp_uniprot_sprot sp|P49252|AMO_LENCU 9 695 + 687 Gaps:28 99.10 667 60.21 0.0 Primary amine oxidase (Fragment) OS Lens culinaris PE 1 SV 3
blastp_uniprot_sprot sp|Q8H1H9|AMO_ARATH 26 684 + 659 Gaps:36 89.75 712 51.02 0.0 Primary amine oxidase OS Arabidopsis thaliana GN At1g62810 PE 2 SV 1
blastp_uniprot_sprot sp|P46883|AMO_ECOLI 27 680 + 654 Gaps:59 82.83 757 35.41 3e-99 Primary amine oxidase OS Escherichia coli (strain K12) GN tynA PE 1 SV 1
blastp_uniprot_sprot sp|P49250|AMO_ENTAE 27 683 + 657 Gaps:57 83.44 755 35.24 1e-98 Primary amine oxidase OS Enterobacter aerogenes GN maoA PE 1 SV 1
blastp_uniprot_sprot sp|P80695|AMO_KLEOK 27 683 + 657 Gaps:59 83.78 752 35.24 7e-97 Primary amine oxidase OS Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN maoA PE 1 SV 2
blastp_uniprot_sprot sp|Q07123|AMO2_ARTS1 27 680 + 654 Gaps:76 94.44 648 32.68 1e-77 Copper methylamine oxidase OS Arthrobacter sp. (strain P1) GN maoII PE 1 SV 1
blastp_uniprot_sprot sp|Q07121|AMO1_ARTS1 27 680 + 654 Gaps:76 94.44 648 32.68 1e-77 Primary amine oxidase OS Arthrobacter sp. (strain P1) GN maoI PE 1 SV 1
blastp_uniprot_sprot sp|Q59118|AMOH_ARTGO 19 681 + 663 Gaps:54 91.37 684 30.56 1e-73 Histamine oxidase OS Arthrobacter globiformis PE 1 SV 3
blastp_uniprot_sprot sp|P46881|PAOX_ARTGO 132 680 + 549 Gaps:53 80.56 638 29.96 2e-61 Phenylethylamine oxidase OS Arthrobacter globiformis PE 1 SV 1

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 118 225 108 SSF54416 none none IPR016182
Pfam 27 112 86 PF02727 "KEGG:00260+1.4.3.21","KEGG:00350+1.4.3.21","KEGG:00360+1.4.3.21","KEGG:00410+1.4.3.21","KEGG:00950+1.4.3.21","KEGG:00960+1.4.3.21","MetaCyc:PWY-5751" Copper amine oxidase, N2 domain IPR015800
Gene3D 207 691 485 G3DSA:2.70.98.20 none none IPR015798
Pfam 120 217 98 PF02728 none Copper amine oxidase, N3 domain IPR015802
SUPERFAMILY 25 117 93 SSF54416 none none IPR016182
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
ProSitePatterns 422 435 14 PS01164 none Copper amine oxidase topaquinone signature. IPR000269
SUPERFAMILY 412 690 279 SSF49998 none none IPR015798
SUPERFAMILY 229 385 157 SSF49998 none none IPR015798
PANTHER 412 684 273 PTHR10638:SF28 none none none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 8 18 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 242 387 146 PF01179 none Copper amine oxidase, enzyme domain IPR015798
Pfam 412 684 273 PF01179 none Copper amine oxidase, enzyme domain IPR015798
Gene3D 122 206 85 G3DSA:3.10.450.40 none none IPR015801
Phobius 24 697 674 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 8 384 377 PTHR10638 none none IPR000269
PANTHER 412 684 273 PTHR10638 none none IPR000269
ProSitePatterns 644 657 14 PS01165 none Copper amine oxidase copper-binding site signature. IPR000269
Gene3D 26 120 95 G3DSA:3.10.450.40 none none IPR015801
PANTHER 8 384 377 PTHR10638:SF28 none none none

2 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 19 18
SignalP_EUK 1 23 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.953 0.033 NON-PLANT 23