Protein : Qrob_P0243500.2 Q. robur
Protein Identifier  ? Qrob_P0243500.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=27) 1.3.3.8 - Tetrahydroberberine oxidase. Code Enzyme  EC:1.3.3.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 525  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity Catalysis of the reaction: UDP-N-acetylmuramate + NADP+ = UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + NADPH + H+.
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103325297 9 520 + 512 Gaps:7 97.01 535 76.88 0.0 reticuline oxidase-like protein
blastp_kegg lcl|pper:PRUPE_ppa004021mg 9 521 + 513 Gaps:7 97.20 535 76.35 0.0 hypothetical protein
blastp_kegg lcl|cam:101508898 1 523 + 523 Gaps:5 96.53 547 74.43 0.0 reticuline oxidase-like protein-like
blastp_kegg lcl|pxb:103952337 21 521 + 501 Gaps:8 94.26 540 76.42 0.0 reticuline oxidase-like protein
blastp_kegg lcl|gmx:100778568 22 523 + 502 Gaps:1 94.02 535 76.94 0.0 reticuline oxidase-like protein-like
blastp_kegg lcl|cic:CICLE_v10014838mg 17 521 + 505 Gaps:2 94.24 538 75.74 0.0 hypothetical protein
blastp_kegg lcl|mdm:103424356 5 520 + 516 Gaps:11 97.23 542 75.71 0.0 reticuline oxidase-like protein
blastp_kegg lcl|cit:102628955 17 521 + 505 Gaps:2 94.24 538 75.54 0.0 reticuline oxidase-like protein-like
blastp_kegg lcl|vvi:100252519 22 520 + 499 Gaps:1 94.16 531 76.80 0.0 reticuline oxidase-like protein-like
blastp_kegg lcl|cic:CICLE_v10018073mg 17 521 + 505 Gaps:2 94.77 535 75.54 0.0 hypothetical protein
blastp_pdb 3d2j_A 4 521 + 518 Gaps:18 95.54 538 39.30 4e-106 mol:protein length:538 berberine bridge-forming enzyme
blastp_pdb 3d2h_A 4 521 + 518 Gaps:18 95.54 538 39.30 4e-106 mol:protein length:538 berberine bridge-forming enzyme
blastp_pdb 3d2d_A 4 521 + 518 Gaps:18 95.54 538 39.30 4e-106 mol:protein length:538 berberine bridge-forming enzyme
blastp_pdb 3gsy_A 16 521 + 506 Gaps:18 96.72 519 39.24 2e-104 mol:protein length:519 Reticuline oxidase Berberine bridge-forming
blastp_pdb 3fw9_A 23 519 + 497 Gaps:18 99.60 495 39.35 8e-103 mol:protein length:495 Reticuline oxidase
blastp_pdb 3fwa_A 23 521 + 499 Gaps:18 99.60 497 39.19 5e-102 mol:protein length:497 Reticuline oxidase
blastp_pdb 3fw7_A 19 519 + 501 Gaps:18 99.80 498 39.03 8e-102 mol:protein length:498 Reticuline oxidase
blastp_pdb 3fw8_A 23 519 + 497 Gaps:18 99.60 495 39.15 3e-101 mol:protein length:495 Reticuline oxidase
blastp_pdb 3rja_A 56 516 + 461 Gaps:53 94.71 473 26.79 3e-22 mol:protein length:473 Carbohydrate oxidase
blastp_pdb 3rj8_A 56 516 + 461 Gaps:53 94.71 473 26.79 3e-22 mol:protein length:473 Carbohydrate oxidase
blastp_uniprot_sprot sp|Q9SVG4|RETOL_ARATH 18 523 + 506 Gaps:5 88.95 570 56.61 0.0 Reticuline oxidase-like protein OS Arabidopsis thaliana GN At4g20830 PE 1 SV 2
blastp_uniprot_sprot sp|Q8GTB6|THCAS_CANSA 7 520 + 514 Gaps:17 96.70 545 49.15 3e-159 Tetrahydrocannabinolic acid synthase OS Cannabis sativa PE 1 SV 1
blastp_uniprot_sprot sp|A6P6V9|CBDAS_CANSA 17 523 + 507 Gaps:15 94.85 544 48.64 1e-156 Cannabidiolic acid synthase OS Cannabis sativa GN CBDAS PE 1 SV 1
blastp_uniprot_sprot sp|A6P6W0|CASL1_CANSA 7 520 + 514 Gaps:25 96.70 545 47.44 3e-156 Cannabidiolic acid synthase-like 1 OS Cannabis sativa GN CBDAS2 PE 2 SV 1
blastp_uniprot_sprot sp|A6P6W1|CASL2_CANSA 7 520 + 514 Gaps:25 96.70 545 47.44 7e-156 Cannabidiolic acid synthase-like 2 OS Cannabis sativa GN CBDAS3 PE 2 SV 1
blastp_uniprot_sprot sp|Q33DQ2|THCAI_CANSA 7 520 + 514 Gaps:21 96.70 545 48.01 4e-155 Inactive tetrahydrocannabinolic acid synthase OS Cannabis sativa PE 3 SV 1
blastp_uniprot_sprot sp|P93479|RETO_PAPSO 4 519 + 516 Gaps:21 95.89 535 39.77 2e-105 Reticuline oxidase OS Papaver somniferum GN BBE1 PE 3 SV 1
blastp_uniprot_sprot sp|P30986|RETO_ESCCA 4 521 + 518 Gaps:18 95.54 538 39.11 2e-104 Reticuline oxidase OS Eschscholzia californica GN BBE1 PE 1 SV 1
blastp_uniprot_sprot sp|O06997|YVDP_BACSU 70 517 + 448 Gaps:56 92.17 447 31.80 4e-26 Uncharacterized FAD-linked oxidoreductase YvdP OS Bacillus subtilis (strain 168) GN yvdP PE 1 SV 1
blastp_uniprot_sprot sp|Q796Y5|YGAK_BACSU 63 519 + 457 Gaps:53 93.13 451 27.86 6e-21 Uncharacterized FAD-linked oxidoreductase YgaK OS Bacillus subtilis (strain 168) GN ygaK PE 3 SV 4

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 523 523 PTHR32448 none none none
Pfam 460 517 58 PF08031 none Berberine and berberine like IPR012951
Phobius 15 19 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 19 19 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 20 524 505 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 126 241 116 G3DSA:3.30.465.10 none none IPR016169
Pfam 72 207 136 PF01565 "KEGG:00520+1.3.1.98","KEGG:00550+1.3.1.98","MetaCyc:PWY-6386","MetaCyc:PWY-6387","UniPathway:UPA00219" FAD binding domain IPR006094
ProSiteProfiles 66 240 175 PS51387 none PCMH-type FAD-binding domain profile. IPR016166
Phobius 4 14 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 15 241 227 SSF56176 none none IPR016166

3 Localization

Analysis Start End Length
SignalP_EUK 1 19 18
SignalP_GRAM_NEGATIVE 1 19 18
SignalP_GRAM_POSITIVE 1 19 18

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 19   Secretory pathway 1 0.944 0.117 NON-PLANT 19