Protein : Qrob_P0243490.2 Q. robur
Protein Identifier  ? Qrob_P0243490.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=27) 1.3.3.8 - Tetrahydroberberine oxidase. Code Enzyme  EC:1.3.3.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 469  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity Catalysis of the reaction: UDP-N-acetylmuramate + NADP+ = UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + NADPH + H+.
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10014802mg 19 467 + 449 Gaps:73 94.37 551 56.92 0.0 hypothetical protein
blastp_kegg lcl|cit:102622911 19 467 + 449 Gaps:66 94.30 544 57.50 0.0 cannabidiolic acid synthase-like 1-like
blastp_kegg lcl|pop:POPTR_0001s46600g 21 467 + 447 Gaps:63 95.31 533 56.69 0.0 POPTRDRAFT_753689 hypothetical protein
blastp_kegg lcl|tcc:TCM_015141 2 467 + 466 Gaps:64 97.77 538 53.42 0.0 FAD-binding Berberine family protein
blastp_kegg lcl|cam:101513715 8 464 + 457 Gaps:63 92.53 562 53.08 0.0 cannabidiolic acid synthase-like 2-like
blastp_kegg lcl|pop:POPTR_0011s16120g 8 466 + 459 Gaps:62 97.56 532 54.34 0.0 POPTRDRAFT_772209 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10018353mg 6 467 + 462 Gaps:65 96.69 543 55.43 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0011s16580g 21 467 + 447 Gaps:62 95.14 535 57.37 0.0 hypothetical protein
blastp_kegg lcl|mtr:MTR_072s1010 9 467 + 459 Gaps:42 86.98 576 54.29 0.0 Reticuline oxidase
blastp_kegg lcl|tcc:TCM_015125 1 466 + 466 Gaps:62 98.87 532 53.99 0.0 FAD-binding Berberine family protein
blastp_pdb 3d2j_A 8 467 + 460 Gaps:68 95.54 538 34.44 1e-82 mol:protein length:538 berberine bridge-forming enzyme
blastp_pdb 3d2h_A 8 467 + 460 Gaps:68 95.54 538 34.44 1e-82 mol:protein length:538 berberine bridge-forming enzyme
blastp_pdb 3d2d_A 8 467 + 460 Gaps:68 95.54 538 34.44 1e-82 mol:protein length:538 berberine bridge-forming enzyme
blastp_pdb 3gsy_A 22 467 + 446 Gaps:68 96.34 519 34.80 2e-82 mol:protein length:519 Reticuline oxidase Berberine bridge-forming
blastp_pdb 3fw9_A 27 467 + 441 Gaps:68 100.00 495 34.95 2e-82 mol:protein length:495 Reticuline oxidase
blastp_pdb 3fw7_A 27 467 + 441 Gaps:68 99.40 498 34.75 8e-81 mol:protein length:498 Reticuline oxidase
blastp_pdb 3fw8_A 27 467 + 441 Gaps:68 100.00 495 34.34 5e-80 mol:protein length:495 Reticuline oxidase
blastp_pdb 3fwa_A 27 467 + 441 Gaps:68 99.60 497 34.34 5e-80 mol:protein length:497 Reticuline oxidase
blastp_pdb 3rja_A 74 466 + 393 Gaps:77 92.18 473 23.17 4e-14 mol:protein length:473 Carbohydrate oxidase
blastp_pdb 3rj8_A 74 466 + 393 Gaps:77 92.18 473 23.17 4e-14 mol:protein length:473 Carbohydrate oxidase
blastp_uniprot_sprot sp|P30986|RETO_ESCCA 8 467 + 460 Gaps:68 95.54 538 34.44 1e-81 Reticuline oxidase OS Eschscholzia californica GN BBE1 PE 1 SV 1
blastp_uniprot_sprot sp|A6P6V9|CBDAS_CANSA 22 466 + 445 Gaps:16 86.58 544 49.68 1e-79 Cannabidiolic acid synthase OS Cannabis sativa GN CBDAS PE 1 SV 1
blastp_uniprot_sprot sp|Q8GTB6|THCAS_CANSA 5 466 + 462 Gaps:19 91.74 545 48.20 3e-76 Tetrahydrocannabinolic acid synthase OS Cannabis sativa PE 1 SV 1
blastp_uniprot_sprot sp|A6P6W1|CASL2_CANSA 5 466 + 462 Gaps:19 91.74 545 47.80 9e-76 Cannabidiolic acid synthase-like 2 OS Cannabis sativa GN CBDAS3 PE 2 SV 1
blastp_uniprot_sprot sp|A6P6W0|CASL1_CANSA 5 466 + 462 Gaps:19 91.74 545 47.60 1e-75 Cannabidiolic acid synthase-like 1 OS Cannabis sativa GN CBDAS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q33DQ2|THCAI_CANSA 5 466 + 462 Gaps:19 91.74 545 47.00 4e-74 Inactive tetrahydrocannabinolic acid synthase OS Cannabis sativa PE 3 SV 1
blastp_uniprot_sprot sp|Q9SVG4|RETOL_ARATH 21 464 + 444 Gaps:10 77.54 570 45.25 7e-69 Reticuline oxidase-like protein OS Arabidopsis thaliana GN At4g20830 PE 1 SV 2
blastp_uniprot_sprot sp|P93479|RETO_PAPSO 12 466 + 455 Gaps:28 84.11 535 41.11 3e-48 Reticuline oxidase OS Papaver somniferum GN BBE1 PE 3 SV 1
blastp_uniprot_sprot sp|P08159|HDNO_ARTOX 73 221 + 149 Gaps:8 31.66 458 32.41 8e-10 6-hydroxy-D-nicotine oxidase OS Arthrobacter oxydans PE 1 SV 2
blastp_uniprot_sprot sp|Q796Y5|YGAK_BACSU 278 466 + 189 Gaps:31 35.03 451 31.65 7e-08 Uncharacterized FAD-linked oxidoreductase YgaK OS Bacillus subtilis (strain 168) GN ygaK PE 3 SV 4

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
ProSiteProfiles 70 267 198 PS51387 none PCMH-type FAD-binding domain profile. IPR016166
Phobius 3 18 16 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 73 133 61 G3DSA:3.30.43.10 none none IPR016167
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 18 199 182 SSF56176 none none IPR016166
Phobius 19 22 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 23 468 446 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 407 464 58 PF08031 none Berberine and berberine like IPR012951
Pfam 74 196 123 PF01565 "KEGG:00520+1.3.1.98","KEGG:00550+1.3.1.98","MetaCyc:PWY-6386","MetaCyc:PWY-6387","UniPathway:UPA00219" FAD binding domain IPR006094
Gene3D 134 199 66 G3DSA:3.30.465.10 none none IPR016169
PANTHER 8 468 461 PTHR32448 none none none

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 22 21
SignalP_GRAM_POSITIVE 1 22 21
SignalP_EUK 1 22 21

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 1 0.966 0.008 NON-PLANT 22