Protein : Qrob_P0237890.2 Q. robur
Protein Identifier  ? Qrob_P0237890.2 Organism . Name  Quercus robur
Score  96.0 Score Type  egn
Protein Description  (M=6) K00162 - pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Code Enzyme  EC:1.2.4.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 352  
Kegg Orthology  K00162
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.
GO:0006086 acetyl-CoA biosynthetic process from pyruvate The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101502417 25 343 + 319 none 88.61 360 93.42 0.0 pyruvate dehydrogenase E1 component subunit beta mitochondrial-like
blastp_kegg lcl|atr:s00016p00190930 3 343 + 341 Gaps:9 88.89 378 90.48 0.0 AMTR_s00016p00190930 hypothetical protein
blastp_kegg lcl|cmo:103498877 4 343 + 340 Gaps:6 89.78 372 91.02 0.0 pyruvate dehydrogenase E1 component subunit beta-1 mitochondrial
blastp_kegg lcl|csv:101220981 15 343 + 329 Gaps:4 87.37 372 92.00 0.0 pyruvate dehydrogenase E1 component subunit beta mitochondrial-like
blastp_kegg lcl|gmx:100777306 25 343 + 319 none 88.61 360 92.48 0.0 pyruvate dehydrogenase E1 component subunit beta mitochondrial-like
blastp_kegg lcl|gmx:100805001 25 343 + 319 none 88.61 360 92.16 0.0 pyruvate dehydrogenase E1 component subunit beta mitochondrial-like
blastp_kegg lcl|rcu:RCOM_1437610 1 343 + 343 Gaps:5 91.85 368 89.05 0.0 pyruvate dehydrogenase putative (EC:1.2.4.1)
blastp_kegg lcl|mtr:MTR_7g005380 13 343 + 331 none 91.69 361 89.73 0.0 Pyruvate dehydrogenase E1 component subunit beta
blastp_kegg lcl|sot:102602262 3 343 + 341 Gaps:1 90.72 377 85.09 0.0 pyruvate dehydrogenase E1 component subunit beta-1 mitochondrial-like
blastp_kegg lcl|pop:POPTR_0001s13350g 25 343 + 319 none 89.11 358 92.48 0.0 POPTRDRAFT_829373 pyruvate dehydrogenase family protein
blastp_pdb 3exi_B 30 343 + 314 Gaps:1 95.74 329 61.90 1e-144 mol:protein length:329 Pyruvate dehydrogenase E1 component subunit b
blastp_pdb 3exh_H 30 343 + 314 Gaps:1 95.74 329 61.90 1e-144 mol:protein length:329 Pyruvate dehydrogenase E1 component subunit b
blastp_pdb 3exh_F 30 343 + 314 Gaps:1 95.74 329 61.90 1e-144 mol:protein length:329 Pyruvate dehydrogenase E1 component subunit b
blastp_pdb 3exh_D 30 343 + 314 Gaps:1 95.74 329 61.90 1e-144 mol:protein length:329 Pyruvate dehydrogenase E1 component subunit b
blastp_pdb 3exh_B 30 343 + 314 Gaps:1 95.74 329 61.90 1e-144 mol:protein length:329 Pyruvate dehydrogenase E1 component subunit b
blastp_pdb 3exg_6 30 343 + 314 Gaps:1 95.74 329 61.90 1e-144 mol:protein length:329 Pyruvate dehydrogenase E1 component subunit b
blastp_pdb 3exg_4 30 343 + 314 Gaps:1 95.74 329 61.90 1e-144 mol:protein length:329 Pyruvate dehydrogenase E1 component subunit b
blastp_pdb 3exg_2 30 343 + 314 Gaps:1 95.74 329 61.90 1e-144 mol:protein length:329 Pyruvate dehydrogenase E1 component subunit b
blastp_pdb 3exg_Z 30 343 + 314 Gaps:1 95.74 329 61.90 1e-144 mol:protein length:329 Pyruvate dehydrogenase E1 component subunit b
blastp_pdb 3exg_X 30 343 + 314 Gaps:1 95.74 329 61.90 1e-144 mol:protein length:329 Pyruvate dehydrogenase E1 component subunit b
blastp_uniprot_sprot sp|Q6Z1G7|ODPB1_ORYSJ 29 343 + 315 none 84.22 374 91.11 0.0 Pyruvate dehydrogenase E1 component subunit beta-1 mitochondrial OS Oryza sativa subsp. japonica GN Os08g0536000 PE 2 SV 1
blastp_uniprot_sprot sp|Q38799|ODPB1_ARATH 14 343 + 330 Gaps:4 89.81 363 88.34 0.0 Pyruvate dehydrogenase E1 component subunit beta-1 mitochondrial OS Arabidopsis thaliana GN PDH2 PE 1 SV 2
blastp_uniprot_sprot sp|Q0J0H4|ODPB2_ORYSJ 29 343 + 315 none 83.78 376 89.84 0.0 Pyruvate dehydrogenase E1 component subunit beta-2 mitochondrial OS Oryza sativa subsp. japonica GN Os09g0509200 PE 2 SV 1
blastp_uniprot_sprot sp|P52904|ODPB_PEA 29 343 + 315 none 87.74 359 89.21 0.0 Pyruvate dehydrogenase E1 component subunit beta mitochondrial OS Pisum sativum PE 1 SV 1
blastp_uniprot_sprot sp|Q86HX0|ODPB_DICDI 27 342 + 316 none 88.76 356 66.46 2e-157 Pyruvate dehydrogenase E1 component subunit beta mitochondrial OS Dictyostelium discoideum GN pdhB PE 1 SV 1
blastp_uniprot_sprot sp|P32473|ODPB_YEAST 4 341 + 338 Gaps:9 93.72 366 63.56 3e-150 Pyruvate dehydrogenase E1 component subunit beta mitochondrial OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN PDB1 PE 1 SV 2
blastp_uniprot_sprot sp|Q09171|ODPB_SCHPO 12 345 + 334 Gaps:5 92.08 366 62.31 3e-148 Pyruvate dehydrogenase E1 component subunit beta mitochondrial OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pdb1 PE 4 SV 1
blastp_uniprot_sprot sp|P11966|ODPB_BOVIN 25 343 + 319 Gaps:1 89.14 359 64.06 4e-148 Pyruvate dehydrogenase E1 component subunit beta mitochondrial OS Bos taurus GN PDHB PE 1 SV 2
blastp_uniprot_sprot sp|Q9D051|ODPB_MOUSE 24 343 + 320 Gaps:1 89.42 359 63.24 6e-148 Pyruvate dehydrogenase E1 component subunit beta mitochondrial OS Mus musculus GN Pdhb PE 1 SV 1
blastp_uniprot_sprot sp|P49432|ODPB_RAT 24 343 + 320 Gaps:1 89.42 359 62.93 2e-147 Pyruvate dehydrogenase E1 component subunit beta mitochondrial OS Rattus norvegicus GN Pdhb PE 1 SV 2

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 31 206 176 SM00861 none Transketolase, pyrimidine binding domain IPR005475
SUPERFAMILY 221 342 122 SSF52922 none none IPR009014
PANTHER 10 343 334 PTHR11624:SF56 "KEGG:00010+1.2.4.1","KEGG:00020+1.2.4.1","KEGG:00620+1.2.4.1";signature_desc=PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA, MITOCHONDRIAL (PTHR11624:SF56) none IPR027110
PANTHER 10 343 334 PTHR11624 none none none
Gene3D 225 342 118 G3DSA:3.40.50.920 none none IPR009014
Gene3D 28 224 197 G3DSA:3.40.50.970 none none IPR029061
Pfam 29 205 177 PF02779 none Transketolase, pyrimidine binding domain IPR005475
SUPERFAMILY 29 210 182 SSF52518 none none IPR029061
Pfam 224 342 119 PF02780 none Transketolase, C-terminal domain IPR005476

0 Localization

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 20   Mitochondrion 2 0.033 0.843 NON-PLANT 20