Protein : Qrob_P0237520.2 Q. robur
Protein Identifier  ? Qrob_P0237520.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR12701//PTHR12701:SF8 - BCR-ASSOCIATED PROTEIN, BAP // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 222  
Kegg Orthology  K14009
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mtr:MTR_4g049540 1 220 + 220 none 99.55 221 73.18 1e-116 hypothetical protein
blastp_kegg lcl|gmx:100820199 1 221 + 221 none 100.00 221 72.40 3e-116 B-cell receptor-associated protein 31-like
blastp_kegg lcl|cam:101498526 1 220 + 220 none 99.55 221 72.73 8e-115 B-cell receptor-associated protein 31-like
blastp_kegg lcl|brp:103848551 1 221 + 221 Gaps:3 100.00 218 73.85 1e-113 uncharacterized LOC103848551
blastp_kegg lcl|aly:ARALYDRAFT_494776 1 221 + 221 Gaps:3 100.00 218 73.85 6e-113 hypothetical protein
blastp_kegg lcl|gmx:100798727 1 211 + 211 none 99.06 213 72.99 1e-111 uncharacterized LOC100798727
blastp_kegg lcl|eus:EUTSA_v10003268mg 1 221 + 221 Gaps:3 100.00 218 73.85 1e-111 hypothetical protein
blastp_kegg lcl|ath:AT5G42570 1 221 + 221 Gaps:3 100.00 218 72.48 4e-111 B-cell receptor-associated 31-like protein
blastp_kegg lcl|vvi:100265893 1 220 + 220 none 99.55 221 71.82 5e-110 uncharacterized LOC100265893
blastp_kegg lcl|pvu:PHAVU_005G115800g 1 220 + 220 none 99.55 221 69.55 9e-110 hypothetical protein
blastp_uniprot_sprot sp|Q54K74|YETL_DICDI 1 195 + 195 Gaps:23 93.20 206 28.12 2e-06 Endoplasmic reticulum transmembrane protein YET-like OS Dictyostelium discoideum GN DDB_G0287543 PE 3 SV 2
rpsblast_cdd gnl|CDD|203268 3 192 + 190 Gaps:31 97.40 192 28.34 1e-10 pfam05529 Bap31 B-cell receptor-associated protein 31-like. Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8. Bap31 is cleaved within its cytosolic domain generating pro-apoptotic p20 Bap31.
rpsblast_kog gnl|CDD|37173 1 211 + 211 Gaps:14 99.54 216 41.86 2e-36 KOG1962 KOG1962 KOG1962 B-cell receptor-associated protein and related proteins [Defense mechanisms].

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 220 220 PTHR12701 none none IPR008417
PANTHER 1 220 220 PTHR12701:SF8 none none none
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 91 111 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 6 22 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Coils 107 128 22 Coil none none none
Phobius 65 90 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 23 42 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Coils 142 212 71 Coil none none none
Phobius 43 64 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 112 221 110 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 3 192 190 PF05529 none B-cell receptor-associated protein 31-like none
SUPERFAMILY 109 220 112 SSF58100 none none none

3 Localization

Analysis Start End Length
TMHMM 42 64 22
TMHMM 4 21 17
TMHMM 88 110 22

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 20   Secretory pathway 1 0.976 0.051 NON-PLANT 20