Protein : Qrob_P0234970.2 Q. robur
Protein Identifier  ? Qrob_P0234970.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=50) K01051 - pectinesterase [EC:3.1.1.11] Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 352  
Kegg Orthology  K01051
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103492792 37 349 + 313 Gaps:1 52.44 595 50.32 1e-97 pectinesterase-like
blastp_kegg lcl|csv:101226854 37 349 + 313 Gaps:1 52.79 591 50.00 1e-95 probable pectinesterase/pectinesterase inhibitor 40-like
blastp_kegg lcl|csv:101205557 37 349 + 313 Gaps:1 55.61 561 49.68 2e-95 probable pectinesterase/pectinesterase inhibitor 40-like
blastp_kegg lcl|mus:103970465 35 349 + 315 Gaps:3 55.48 566 48.41 2e-94 pectinesterase-like
blastp_kegg lcl|vvi:100245304 37 345 + 309 Gaps:1 54.90 561 50.00 2e-94 probable pectinesterase/pectinesterase inhibitor 40-like
blastp_kegg lcl|gmx:100802881 37 350 + 314 Gaps:3 55.69 562 49.52 3e-94 probable pectinesterase/pectinesterase inhibitor 40-like
blastp_kegg lcl|sly:101260941 37 349 + 313 Gaps:3 54.17 576 49.36 3e-93 probable pectinesterase/pectinesterase inhibitor 40-like
blastp_kegg lcl|rcu:RCOM_1179070 37 349 + 313 Gaps:1 56.01 557 48.72 6e-93 Pectinesterase-3 precursor putative (EC:3.1.1.11)
blastp_kegg lcl|pop:POPTR_0002s20370g 37 345 + 309 Gaps:1 55.20 558 49.68 2e-92 POPTRDRAFT_799194 hypothetical protein
blastp_kegg lcl|sot:102588169 37 349 + 313 Gaps:3 65.14 479 48.72 2e-92 pectinesterase-like
blastp_pdb 1xg2_A 37 349 + 313 Gaps:1 98.42 317 41.35 3e-79 mol:protein length:317 Pectinesterase 1
blastp_pdb 1gq8_A 36 349 + 314 Gaps:1 98.12 319 41.85 6e-78 mol:protein length:319 PECTINESTERASE
blastp_pdb 2ntq_B 41 310 + 270 Gaps:58 90.06 342 33.77 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 41 310 + 270 Gaps:58 90.06 342 33.77 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 41 310 + 270 Gaps:58 90.06 342 33.77 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 41 310 + 270 Gaps:58 90.06 342 33.77 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 41 310 + 270 Gaps:58 90.06 342 33.77 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 41 310 + 270 Gaps:58 90.06 342 33.77 5e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 1qjv_B 41 310 + 270 Gaps:58 90.06 342 33.77 7e-27 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 41 310 + 270 Gaps:58 90.06 342 33.77 7e-27 mol:protein length:342 PECTIN METHYLESTERASE
blastp_uniprot_sprot sp|O04887|PME2_CITSI 29 349 + 321 Gaps:4 62.16 510 47.63 7e-94 Pectinesterase 2 OS Citrus sinensis GN PECS-2.1 PE 2 SV 1
blastp_uniprot_sprot sp|O81301|PME40_ARATH 37 345 + 309 Gaps:1 59.46 518 46.10 2e-88 Probable pectinesterase/pectinesterase inhibitor 40 OS Arabidopsis thaliana GN PME40 PE 2 SV 1
blastp_uniprot_sprot sp|P85076|PME_ACTDE 36 344 + 309 Gaps:1 95.95 321 47.08 3e-88 Pectinesterase OS Actinidia deliciosa PE 1 SV 1
blastp_uniprot_sprot sp|O81415|PME39_ARATH 37 348 + 312 Gaps:1 58.46 532 45.34 2e-87 Probable pectinesterase/pectinesterase inhibitor 39 OS Arabidopsis thaliana GN PME39 PE 2 SV 1
blastp_uniprot_sprot sp|Q84R10|PME36_ARATH 19 349 + 331 Gaps:11 63.20 519 42.99 3e-87 Probable pectinesterase/pectinesterase inhibitor 36 OS Arabidopsis thaliana GN PME36 PE 2 SV 2
blastp_uniprot_sprot sp|O22149|PME17_ARATH 37 349 + 313 Gaps:7 59.88 511 47.71 4e-86 Probable pectinesterase/pectinesterase inhibitor 17 OS Arabidopsis thaliana GN PME17 PE 2 SV 2
blastp_uniprot_sprot sp|P83947|PME1_FICPW 36 349 + 314 Gaps:1 57.43 545 44.73 5e-86 Pectinesterase/pectinesterase inhibitor OS Ficus pumila var. awkeotsang PE 1 SV 1
blastp_uniprot_sprot sp|Q43062|PME_PRUPE 37 346 + 310 Gaps:10 59.39 522 46.77 2e-84 Pectinesterase/pectinesterase inhibitor PPE8B OS Prunus persica PE 2 SV 1
blastp_uniprot_sprot sp|O48711|PME12_ARATH 35 349 + 315 Gaps:2 57.22 547 46.33 2e-84 Probable pectinesterase/pectinesterase inhibitor 12 OS Arabidopsis thaliana GN PME12 PE 2 SV 1
blastp_uniprot_sprot sp|Q1JPL7|PME18_ARATH 21 345 + 325 Gaps:5 57.45 557 44.69 2e-84 Pectinesterase/pectinesterase inhibitor 18 OS Arabidopsis thaliana GN PME18 PE 1 SV 3

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 35 351 317 PTHR31707:SF1 none none none
Pfam 37 334 298 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 24 351 328 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 36 348 313 G3DSA:2.160.20.10 none none IPR012334
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 35 348 314 SSF51126 none none IPR011050
ProSitePatterns 181 190 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
Phobius 8 18 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 35 351 317 PTHR31707 none none none

3 Localization

Analysis Start End Length
TMHMM 7 29 22
SignalP_EUK 1 23 22
SignalP_GRAM_POSITIVE 1 30 29

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.953 0.028 NON-PLANT 23